Gene : Eucgr.I02627 E. grandis v2.0
Defline:  (1 of 1) PTHR13900 - TRANSCRIPTION INITIATION FACTOR TFIID Genomic Order:  2218
Name:  ? Eucgr.I02627 Secondary Identifier:  ? PAC:32064328
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02627 0.5kb upstream 0.5kb upstream 17943 true Chr09: 37432767-37450709 Eucalyptus grandis
Eucgr.I02627 0.5kb upstream 0.5kb upstream 500 false Chr09: 37432767-37433266 Eucalyptus grandis
Eucgr.I02627 0.5kb downstream 0.5kb downstream 17943 true Chr09: 37433267-37451209 Eucalyptus grandis
Eucgr.I02627 0.5kb downstream 0.5kb downstream 500 false Chr09: 37450710-37451209 Eucalyptus grandis
Eucgr.I02627 1.0kb upstream 1.0kb upstream 18443 true Chr09: 37432267-37450709 Eucalyptus grandis
Eucgr.I02627 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37432267-37433266 Eucalyptus grandis
Eucgr.I02627 1.0kb downstream 1.0kb downstream 18443 true Chr09: 37433267-37451709 Eucalyptus grandis
Eucgr.I02627 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37450710-37451709 Eucalyptus grandis
Eucgr.I02627 2.0kb upstream 2.0kb upstream 19443 true Chr09: 37431267-37450709 Eucalyptus grandis
Eucgr.I02627 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37431267-37433266 Eucalyptus grandis
Eucgr.I02627 2.0kb downstream 2.0kb downstream 19443 true Chr09: 37433267-37452709 Eucalyptus grandis
Eucgr.I02627 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37450710-37452709 Eucalyptus grandis
Eucgr.I02627 5.0kb upstream 5.0kb upstream 22443 true Chr09: 37428267-37450709 Eucalyptus grandis
Eucgr.I02627 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37428267-37433266 Eucalyptus grandis
Eucgr.I02627 5.0kb downstream 5.0kb downstream 22443 true Chr09: 37433267-37455709 Eucalyptus grandis
Eucgr.I02627 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37450710-37455709 Eucalyptus grandis
Eucgr.I02627 10.0kb upstream 10.0kb upstream 27443 true Chr09: 37423267-37450709 Eucalyptus grandis
Eucgr.I02627 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37423267-37433266 Eucalyptus grandis
Eucgr.I02627 10.0kb downstream 10.0kb downstream 27443 true Chr09: 37433267-37460709 Eucalyptus grandis
Eucgr.I02627 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37450710-37460709 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067609 5270 Rosid View MSA
123748970 5271 Pentapetalae View MSA
122794337 5272 Eudicot View MSA
122046359 5273 Angiosperm View MSA
121347140 5274 Embryophyte View MSA
123423919 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.50136 0.0 18.8277    
cufflinks 6.37389 0.0 14.0955    
cufflinks 9.809 0.0 21.8086    
cufflinks 6.83062 0.0 15.1095    
cufflinks 6.00526 0.0 13.2836   Low
cufflinks 10.61 0.0 23.5726   High

0 Strain