Gene : Eucgr.I02537 E. grandis v2.0
Defline:  (1 of 1) KOG0540 - 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta Genomic Order:  2150
Name:  ? Eucgr.I02537 Secondary Identifier:  ? PAC:32062888
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1264 Eucalyptus grandis pathologic  
Egrandis PWY-4381 Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-7388 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02537 0.5kb upstream 0.5kb upstream 1981 true Chr09: 36392994-36394974 Eucalyptus grandis
Eucgr.I02537 0.5kb upstream 0.5kb upstream 500 false Chr09: 36392994-36393493 Eucalyptus grandis
Eucgr.I02537 0.5kb downstream 0.5kb downstream 1981 true Chr09: 36393494-36395474 Eucalyptus grandis
Eucgr.I02537 0.5kb downstream 0.5kb downstream 500 false Chr09: 36394975-36395474 Eucalyptus grandis
Eucgr.I02537 1.0kb upstream 1.0kb upstream 2481 true Chr09: 36392494-36394974 Eucalyptus grandis
Eucgr.I02537 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36392494-36393493 Eucalyptus grandis
Eucgr.I02537 1.0kb downstream 1.0kb downstream 2481 true Chr09: 36393494-36395974 Eucalyptus grandis
Eucgr.I02537 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36394975-36395974 Eucalyptus grandis
Eucgr.I02537 2.0kb upstream 2.0kb upstream 3481 true Chr09: 36391494-36394974 Eucalyptus grandis
Eucgr.I02537 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36391494-36393493 Eucalyptus grandis
Eucgr.I02537 2.0kb downstream 2.0kb downstream 3481 true Chr09: 36393494-36396974 Eucalyptus grandis
Eucgr.I02537 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36394975-36396974 Eucalyptus grandis
Eucgr.I02537 5.0kb upstream 5.0kb upstream 6481 true Chr09: 36388494-36394974 Eucalyptus grandis
Eucgr.I02537 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36388494-36393493 Eucalyptus grandis
Eucgr.I02537 5.0kb downstream 5.0kb downstream 6481 true Chr09: 36393494-36399974 Eucalyptus grandis
Eucgr.I02537 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36394975-36399974 Eucalyptus grandis
Eucgr.I02537 10.0kb upstream 10.0kb upstream 11481 true Chr09: 36383494-36394974 Eucalyptus grandis
Eucgr.I02537 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36383494-36393493 Eucalyptus grandis
Eucgr.I02537 10.0kb downstream 10.0kb downstream 11481 true Chr09: 36393494-36404974 Eucalyptus grandis
Eucgr.I02537 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36394975-36404974 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050309 5270 Rosid View MSA
123748831 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.571432 0.0 1.84438    
cufflinks 0.493191 0.0 1.58781 Low  
cufflinks 0.254547 0.0 0.903925 Low  
cufflinks 0.148491 0.0 0.559472 Low Low
cufflinks 0.364578 0.0 1.23423 Low  
cufflinks 0.669146 0.0 2.15202 Low High

0 Strain