Gene : Eucgr.I02452 E. grandis v2.0
Defline:  (1 of 1) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  2080
Name:  ? Eucgr.I02452 Secondary Identifier:  ? PAC:32063652
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3781 Eucalyptus grandis pathologic  
Egrandis PWY-4302 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-5690 Eucalyptus grandis pathologic  
Egrandis PWY-7279 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02452 0.5kb upstream 0.5kb upstream 9111 true Chr09: 35008908-35018018 Eucalyptus grandis
Eucgr.I02452 0.5kb upstream 0.5kb upstream 500 false Chr09: 35017519-35018018 Eucalyptus grandis
Eucgr.I02452 0.5kb downstream 0.5kb downstream 9111 true Chr09: 35008408-35017518 Eucalyptus grandis
Eucgr.I02452 0.5kb downstream 0.5kb downstream 500 false Chr09: 35008408-35008907 Eucalyptus grandis
Eucgr.I02452 1.0kb upstream 1.0kb upstream 9611 true Chr09: 35008908-35018518 Eucalyptus grandis
Eucgr.I02452 1.0kb upstream 1.0kb upstream 1000 false Chr09: 35017519-35018518 Eucalyptus grandis
Eucgr.I02452 1.0kb downstream 1.0kb downstream 9611 true Chr09: 35007908-35017518 Eucalyptus grandis
Eucgr.I02452 1.0kb downstream 1.0kb downstream 1000 false Chr09: 35007908-35008907 Eucalyptus grandis
Eucgr.I02452 2.0kb upstream 2.0kb upstream 10611 true Chr09: 35008908-35019518 Eucalyptus grandis
Eucgr.I02452 2.0kb upstream 2.0kb upstream 2000 false Chr09: 35017519-35019518 Eucalyptus grandis
Eucgr.I02452 2.0kb downstream 2.0kb downstream 10611 true Chr09: 35006908-35017518 Eucalyptus grandis
Eucgr.I02452 2.0kb downstream 2.0kb downstream 2000 false Chr09: 35006908-35008907 Eucalyptus grandis
Eucgr.I02452 5.0kb upstream 5.0kb upstream 13611 true Chr09: 35008908-35022518 Eucalyptus grandis
Eucgr.I02452 5.0kb upstream 5.0kb upstream 5000 false Chr09: 35017519-35022518 Eucalyptus grandis
Eucgr.I02452 5.0kb downstream 5.0kb downstream 13611 true Chr09: 35003908-35017518 Eucalyptus grandis
Eucgr.I02452 5.0kb downstream 5.0kb downstream 5000 false Chr09: 35003908-35008907 Eucalyptus grandis
Eucgr.I02452 10.0kb upstream 10.0kb upstream 18611 true Chr09: 35008908-35027518 Eucalyptus grandis
Eucgr.I02452 10.0kb upstream 10.0kb upstream 10000 false Chr09: 35017519-35027518 Eucalyptus grandis
Eucgr.I02452 10.0kb downstream 10.0kb downstream 18611 true Chr09: 34998908-35017518 Eucalyptus grandis
Eucgr.I02452 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34998908-35008907 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.3254 0.0 122.749 High High
cufflinks 26.1169 0.0 58.1838   Low
cufflinks 50.5725 0.0 116.334 High  
cufflinks 27.9743 0.0 62.5239    
cufflinks 31.4758 0.0 70.4982    
cufflinks 42.648 0.0 96.6507 High  

0 Strain