Gene : Eucgr.J00340 E. grandis v2.0
Defline:  (1 of 1) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Genomic Order:  297
Name:  ? Eucgr.J00340 Secondary Identifier:  ? PAC:32035066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00340 0.5kb upstream 0.5kb upstream 8798 true Chr10: 3330267-3339064 Eucalyptus grandis
Eucgr.J00340 0.5kb upstream 0.5kb upstream 500 false Chr10: 3330267-3330766 Eucalyptus grandis
Eucgr.J00340 0.5kb downstream 0.5kb downstream 8798 true Chr10: 3330767-3339564 Eucalyptus grandis
Eucgr.J00340 0.5kb downstream 0.5kb downstream 500 false Chr10: 3339065-3339564 Eucalyptus grandis
Eucgr.J00340 1.0kb upstream 1.0kb upstream 9298 true Chr10: 3329767-3339064 Eucalyptus grandis
Eucgr.J00340 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3329767-3330766 Eucalyptus grandis
Eucgr.J00340 1.0kb downstream 1.0kb downstream 9298 true Chr10: 3330767-3340064 Eucalyptus grandis
Eucgr.J00340 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3339065-3340064 Eucalyptus grandis
Eucgr.J00340 2.0kb upstream 2.0kb upstream 10298 true Chr10: 3328767-3339064 Eucalyptus grandis
Eucgr.J00340 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3328767-3330766 Eucalyptus grandis
Eucgr.J00340 2.0kb downstream 2.0kb downstream 10298 true Chr10: 3330767-3341064 Eucalyptus grandis
Eucgr.J00340 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3339065-3341064 Eucalyptus grandis
Eucgr.J00340 5.0kb upstream 5.0kb upstream 13298 true Chr10: 3325767-3339064 Eucalyptus grandis
Eucgr.J00340 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3325767-3330766 Eucalyptus grandis
Eucgr.J00340 5.0kb downstream 5.0kb downstream 13298 true Chr10: 3330767-3344064 Eucalyptus grandis
Eucgr.J00340 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3339065-3344064 Eucalyptus grandis
Eucgr.J00340 10.0kb upstream 10.0kb upstream 18298 true Chr10: 3320767-3339064 Eucalyptus grandis
Eucgr.J00340 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3320767-3330766 Eucalyptus grandis
Eucgr.J00340 10.0kb downstream 10.0kb downstream 18298 true Chr10: 3330767-3349064 Eucalyptus grandis
Eucgr.J00340 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3339065-3349064 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.2062 0.0 15.9999    
cufflinks 4.81736 0.0 10.7982    
cufflinks 7.71682 0.0 17.0918    
cufflinks 4.18284 0.0 9.42938    
cufflinks 4.06807 0.0 9.22013   Low
cufflinks 9.95742 0.0 22.0278   High

0 Strain