Gene : Eucgr.J00312 E. grandis v2.0
Defline:  (1 of 1) PF14966 - DNA repair REX1-B (DNA_repr_REX1B) Genomic Order:  270
Name:  ? Eucgr.J00312 Secondary Identifier:  ? PAC:32035616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00312 0.5kb upstream 0.5kb upstream 4105 true Chr10: 3148270-3152374 Eucalyptus grandis
Eucgr.J00312 0.5kb upstream 0.5kb upstream 500 false Chr10: 3148270-3148769 Eucalyptus grandis
Eucgr.J00312 0.5kb downstream 0.5kb downstream 4105 true Chr10: 3148770-3152874 Eucalyptus grandis
Eucgr.J00312 0.5kb downstream 0.5kb downstream 500 false Chr10: 3152375-3152874 Eucalyptus grandis
Eucgr.J00312 1.0kb upstream 1.0kb upstream 4605 true Chr10: 3147770-3152374 Eucalyptus grandis
Eucgr.J00312 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3147770-3148769 Eucalyptus grandis
Eucgr.J00312 1.0kb downstream 1.0kb downstream 4605 true Chr10: 3148770-3153374 Eucalyptus grandis
Eucgr.J00312 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3152375-3153374 Eucalyptus grandis
Eucgr.J00312 2.0kb upstream 2.0kb upstream 5605 true Chr10: 3146770-3152374 Eucalyptus grandis
Eucgr.J00312 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3146770-3148769 Eucalyptus grandis
Eucgr.J00312 2.0kb downstream 2.0kb downstream 5605 true Chr10: 3148770-3154374 Eucalyptus grandis
Eucgr.J00312 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3152375-3154374 Eucalyptus grandis
Eucgr.J00312 5.0kb upstream 5.0kb upstream 8605 true Chr10: 3143770-3152374 Eucalyptus grandis
Eucgr.J00312 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3143770-3148769 Eucalyptus grandis
Eucgr.J00312 5.0kb downstream 5.0kb downstream 8605 true Chr10: 3148770-3157374 Eucalyptus grandis
Eucgr.J00312 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3152375-3157374 Eucalyptus grandis
Eucgr.J00312 10.0kb upstream 10.0kb upstream 13605 true Chr10: 3138770-3152374 Eucalyptus grandis
Eucgr.J00312 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3138770-3148769 Eucalyptus grandis
Eucgr.J00312 10.0kb downstream 10.0kb downstream 13605 true Chr10: 3148770-3162374 Eucalyptus grandis
Eucgr.J00312 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3152375-3162374 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062488 5270 Rosid View MSA
123750657 5271 Pentapetalae View MSA
122790384 5272 Eudicot View MSA
122048656 5273 Angiosperm View MSA
121344631 5274 Embryophyte View MSA
123424475 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9361 0.0 26.5057    
cufflinks 17.8297 0.0 41.2403    
cufflinks 9.59428 0.0 28.2223   Low
cufflinks 17.2421 0.0 39.9564    
cufflinks 21.588 0.0 51.5412   High
cufflinks 10.9108 0.0 31.0582    

0 Strain