Gene : Eucgr.J00329 E. grandis v2.0
Defline:  (1 of 2) 2.8.1.8 - Lipoyl synthase / Lipoate synthase Genomic Order:  287
Name:  ? Eucgr.J00329 Secondary Identifier:  ? PAC:32034509
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-501 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00329 0.5kb upstream 0.5kb upstream 4887 true Chr10: 3279590-3284476 Eucalyptus grandis
Eucgr.J00329 0.5kb upstream 0.5kb upstream 500 false Chr10: 3283977-3284476 Eucalyptus grandis
Eucgr.J00329 0.5kb downstream 0.5kb downstream 4887 true Chr10: 3279090-3283976 Eucalyptus grandis
Eucgr.J00329 0.5kb downstream 0.5kb downstream 500 false Chr10: 3279090-3279589 Eucalyptus grandis
Eucgr.J00329 1.0kb upstream 1.0kb upstream 5387 true Chr10: 3279590-3284976 Eucalyptus grandis
Eucgr.J00329 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3283977-3284976 Eucalyptus grandis
Eucgr.J00329 1.0kb downstream 1.0kb downstream 5387 true Chr10: 3278590-3283976 Eucalyptus grandis
Eucgr.J00329 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3278590-3279589 Eucalyptus grandis
Eucgr.J00329 2.0kb upstream 2.0kb upstream 6387 true Chr10: 3279590-3285976 Eucalyptus grandis
Eucgr.J00329 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3283977-3285976 Eucalyptus grandis
Eucgr.J00329 2.0kb downstream 2.0kb downstream 6387 true Chr10: 3277590-3283976 Eucalyptus grandis
Eucgr.J00329 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3277590-3279589 Eucalyptus grandis
Eucgr.J00329 5.0kb upstream 5.0kb upstream 9387 true Chr10: 3279590-3288976 Eucalyptus grandis
Eucgr.J00329 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3283977-3288976 Eucalyptus grandis
Eucgr.J00329 5.0kb downstream 5.0kb downstream 9387 true Chr10: 3274590-3283976 Eucalyptus grandis
Eucgr.J00329 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3274590-3279589 Eucalyptus grandis
Eucgr.J00329 10.0kb upstream 10.0kb upstream 14387 true Chr10: 3279590-3293976 Eucalyptus grandis
Eucgr.J00329 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3283977-3293976 Eucalyptus grandis
Eucgr.J00329 10.0kb downstream 10.0kb downstream 14387 true Chr10: 3269590-3283976 Eucalyptus grandis
Eucgr.J00329 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3269590-3279589 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041417 5273 Angiosperm View MSA
124063598 5270 Rosid View MSA
123745953 5271 Pentapetalae View MSA
122793471 5272 Eudicot View MSA
121346374 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.12846 0.0 14.6564    
cufflinks 4.81431 0.0 11.7743    
cufflinks 8.04695 0.0 18.7906    
cufflinks 6.18503 0.0 14.7399    
cufflinks 4.17554 0.0 10.3895   Low
cufflinks 10.5654 0.0 24.1491   High

0 Strain