Gene : Eucgr.J00278 E. grandis v2.0
Defline:  (1 of 1) PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  243
Name:  ? Eucgr.J00278 Secondary Identifier:  ? PAC:32034200
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00278 0.5kb upstream 0.5kb upstream 4328 true Chr10: 2897312-2901639 Eucalyptus grandis
Eucgr.J00278 0.5kb upstream 0.5kb upstream 500 false Chr10: 2897312-2897811 Eucalyptus grandis
Eucgr.J00278 0.5kb downstream 0.5kb downstream 4328 true Chr10: 2897812-2902139 Eucalyptus grandis
Eucgr.J00278 0.5kb downstream 0.5kb downstream 500 false Chr10: 2901640-2902139 Eucalyptus grandis
Eucgr.J00278 1.0kb upstream 1.0kb upstream 4828 true Chr10: 2896812-2901639 Eucalyptus grandis
Eucgr.J00278 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2896812-2897811 Eucalyptus grandis
Eucgr.J00278 1.0kb downstream 1.0kb downstream 4828 true Chr10: 2897812-2902639 Eucalyptus grandis
Eucgr.J00278 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2901640-2902639 Eucalyptus grandis
Eucgr.J00278 2.0kb upstream 2.0kb upstream 5828 true Chr10: 2895812-2901639 Eucalyptus grandis
Eucgr.J00278 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2895812-2897811 Eucalyptus grandis
Eucgr.J00278 2.0kb downstream 2.0kb downstream 5828 true Chr10: 2897812-2903639 Eucalyptus grandis
Eucgr.J00278 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2901640-2903639 Eucalyptus grandis
Eucgr.J00278 5.0kb upstream 5.0kb upstream 8828 true Chr10: 2892812-2901639 Eucalyptus grandis
Eucgr.J00278 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2892812-2897811 Eucalyptus grandis
Eucgr.J00278 5.0kb downstream 5.0kb downstream 8828 true Chr10: 2897812-2906639 Eucalyptus grandis
Eucgr.J00278 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2901640-2906639 Eucalyptus grandis
Eucgr.J00278 10.0kb upstream 10.0kb upstream 13828 true Chr10: 2887812-2901639 Eucalyptus grandis
Eucgr.J00278 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2887812-2897811 Eucalyptus grandis
Eucgr.J00278 10.0kb downstream 10.0kb downstream 13828 true Chr10: 2897812-2911639 Eucalyptus grandis
Eucgr.J00278 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2901640-2911639 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.70114 0.0 8.77328   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.7584 0.0 6.71413    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.839428 0.0 2.30192   Low
cufflinks 1.48496 0.0 3.86299    

0 Strain