Gene : Eucgr.J00196 E. grandis v2.0
Defline:  (1 of 1) PTHR32285:SF10 - PROTEIN ESKIMO 1 Genomic Order:  174
Name:  ? Eucgr.J00196 Secondary Identifier:  ? PAC:32033612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00196 0.5kb upstream 0.5kb upstream 4434 true Chr10: 2019456-2023889 Eucalyptus grandis
Eucgr.J00196 0.5kb upstream 0.5kb upstream 500 false Chr10: 2023390-2023889 Eucalyptus grandis
Eucgr.J00196 0.5kb downstream 0.5kb downstream 4434 true Chr10: 2018956-2023389 Eucalyptus grandis
Eucgr.J00196 0.5kb downstream 0.5kb downstream 500 false Chr10: 2018956-2019455 Eucalyptus grandis
Eucgr.J00196 1.0kb upstream 1.0kb upstream 4934 true Chr10: 2019456-2024389 Eucalyptus grandis
Eucgr.J00196 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2023390-2024389 Eucalyptus grandis
Eucgr.J00196 1.0kb downstream 1.0kb downstream 4934 true Chr10: 2018456-2023389 Eucalyptus grandis
Eucgr.J00196 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2018456-2019455 Eucalyptus grandis
Eucgr.J00196 2.0kb upstream 2.0kb upstream 5934 true Chr10: 2019456-2025389 Eucalyptus grandis
Eucgr.J00196 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2023390-2025389 Eucalyptus grandis
Eucgr.J00196 2.0kb downstream 2.0kb downstream 5934 true Chr10: 2017456-2023389 Eucalyptus grandis
Eucgr.J00196 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2017456-2019455 Eucalyptus grandis
Eucgr.J00196 5.0kb upstream 5.0kb upstream 8934 true Chr10: 2019456-2028389 Eucalyptus grandis
Eucgr.J00196 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2023390-2028389 Eucalyptus grandis
Eucgr.J00196 5.0kb downstream 5.0kb downstream 8934 true Chr10: 2014456-2023389 Eucalyptus grandis
Eucgr.J00196 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2014456-2019455 Eucalyptus grandis
Eucgr.J00196 10.0kb upstream 10.0kb upstream 13934 true Chr10: 2019456-2033389 Eucalyptus grandis
Eucgr.J00196 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2023390-2033389 Eucalyptus grandis
Eucgr.J00196 10.0kb downstream 10.0kb downstream 13934 true Chr10: 2009456-2023389 Eucalyptus grandis
Eucgr.J00196 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2009456-2019455 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066742 5270 Rosid View MSA
123749554 5271 Pentapetalae View MSA
122786005 5272 Eudicot View MSA
122051004 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121312244 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.23016 0.0 6.19907    
cufflinks 139.746 0.0 337.811 High High
cufflinks 1.14747 0.0 3.48356   Low
cufflinks 164.771 0.0 476.964 High High
cufflinks 15.9736 0.0 43.3343    
cufflinks 6.9636 0.0 16.2111    

0 Strain