Gene : Eucgr.J00200 E. grandis v2.0
Defline:  (1 of 1) 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Genomic Order:  178
Name:  ? Eucgr.J00200 Secondary Identifier:  ? PAC:32034362
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6013 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00200 0.5kb upstream 0.5kb upstream 3881 true Chr10: 2043340-2047220 Eucalyptus grandis
Eucgr.J00200 0.5kb upstream 0.5kb upstream 500 false Chr10: 2043340-2043839 Eucalyptus grandis
Eucgr.J00200 0.5kb downstream 0.5kb downstream 3881 true Chr10: 2043840-2047720 Eucalyptus grandis
Eucgr.J00200 0.5kb downstream 0.5kb downstream 500 false Chr10: 2047221-2047720 Eucalyptus grandis
Eucgr.J00200 1.0kb upstream 1.0kb upstream 4381 true Chr10: 2042840-2047220 Eucalyptus grandis
Eucgr.J00200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2042840-2043839 Eucalyptus grandis
Eucgr.J00200 1.0kb downstream 1.0kb downstream 4381 true Chr10: 2043840-2048220 Eucalyptus grandis
Eucgr.J00200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2047221-2048220 Eucalyptus grandis
Eucgr.J00200 2.0kb upstream 2.0kb upstream 5381 true Chr10: 2041840-2047220 Eucalyptus grandis
Eucgr.J00200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2041840-2043839 Eucalyptus grandis
Eucgr.J00200 2.0kb downstream 2.0kb downstream 5381 true Chr10: 2043840-2049220 Eucalyptus grandis
Eucgr.J00200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2047221-2049220 Eucalyptus grandis
Eucgr.J00200 5.0kb upstream 5.0kb upstream 8381 true Chr10: 2038840-2047220 Eucalyptus grandis
Eucgr.J00200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2038840-2043839 Eucalyptus grandis
Eucgr.J00200 5.0kb downstream 5.0kb downstream 8381 true Chr10: 2043840-2052220 Eucalyptus grandis
Eucgr.J00200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2047221-2052220 Eucalyptus grandis
Eucgr.J00200 10.0kb upstream 10.0kb upstream 13381 true Chr10: 2033840-2047220 Eucalyptus grandis
Eucgr.J00200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2033840-2043839 Eucalyptus grandis
Eucgr.J00200 10.0kb downstream 10.0kb downstream 13381 true Chr10: 2043840-2057220 Eucalyptus grandis
Eucgr.J00200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2047221-2057220 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 162.731 0.0 400.895 High  
cufflinks 7.86369 0.0 18.1316   Low
cufflinks 194.347 0.0 488.682 High High
cufflinks 19.9274 0.0 44.1256    
cufflinks 8.58351 0.0 19.6585   Low
cufflinks 136.706 0.0 330.012 High  

0 Strain