Gene : Eucgr.J00170 E. grandis v2.0
Defline:  (1 of 3) PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 Genomic Order:  151
Name:  ? Eucgr.J00170 Secondary Identifier:  ? PAC:32032691
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00170 0.5kb upstream 0.5kb upstream 4168 true Chr10: 1813421-1817588 Eucalyptus grandis
Eucgr.J00170 0.5kb upstream 0.5kb upstream 500 false Chr10: 1817089-1817588 Eucalyptus grandis
Eucgr.J00170 0.5kb downstream 0.5kb downstream 4168 true Chr10: 1812921-1817088 Eucalyptus grandis
Eucgr.J00170 0.5kb downstream 0.5kb downstream 500 false Chr10: 1812921-1813420 Eucalyptus grandis
Eucgr.J00170 1.0kb upstream 1.0kb upstream 4668 true Chr10: 1813421-1818088 Eucalyptus grandis
Eucgr.J00170 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1817089-1818088 Eucalyptus grandis
Eucgr.J00170 1.0kb downstream 1.0kb downstream 4668 true Chr10: 1812421-1817088 Eucalyptus grandis
Eucgr.J00170 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1812421-1813420 Eucalyptus grandis
Eucgr.J00170 2.0kb upstream 2.0kb upstream 5668 true Chr10: 1813421-1819088 Eucalyptus grandis
Eucgr.J00170 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1817089-1819088 Eucalyptus grandis
Eucgr.J00170 2.0kb downstream 2.0kb downstream 5668 true Chr10: 1811421-1817088 Eucalyptus grandis
Eucgr.J00170 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1811421-1813420 Eucalyptus grandis
Eucgr.J00170 5.0kb upstream 5.0kb upstream 8668 true Chr10: 1813421-1822088 Eucalyptus grandis
Eucgr.J00170 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1817089-1822088 Eucalyptus grandis
Eucgr.J00170 5.0kb downstream 5.0kb downstream 8668 true Chr10: 1808421-1817088 Eucalyptus grandis
Eucgr.J00170 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1808421-1813420 Eucalyptus grandis
Eucgr.J00170 10.0kb upstream 10.0kb upstream 13668 true Chr10: 1813421-1827088 Eucalyptus grandis
Eucgr.J00170 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1817089-1827088 Eucalyptus grandis
Eucgr.J00170 10.0kb downstream 10.0kb downstream 13668 true Chr10: 1803421-1817088 Eucalyptus grandis
Eucgr.J00170 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1803421-1813420 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064241 5270 Rosid View MSA
123747556 5271 Pentapetalae View MSA
122794999 5272 Eudicot View MSA
122044397 5273 Angiosperm View MSA
121310289 5274 Embryophyte View MSA
123347816 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01244 0.0 3.19092    
cufflinks 490.587 0.0 2038.57 High High
cufflinks 0.386205 0.0 1.46831   Low
cufflinks 349.774 0.0 1256.31 High High
cufflinks 42.5989 0.0 98.6415 High  
cufflinks 4.51603 0.0 11.3277    

0 Strain