Gene : Eucgr.J00190 E. grandis v2.0
Defline:  (1 of 1) PTHR12565//PTHR12565:SF181 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  168
Name:  ? Eucgr.J00190 Secondary Identifier:  ? PAC:32034753
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00190 0.5kb upstream 0.5kb upstream 2839 true Chr10: 1965095-1967933 Eucalyptus grandis
Eucgr.J00190 0.5kb upstream 0.5kb upstream 500 false Chr10: 1967434-1967933 Eucalyptus grandis
Eucgr.J00190 0.5kb downstream 0.5kb downstream 2839 true Chr10: 1964595-1967433 Eucalyptus grandis
Eucgr.J00190 0.5kb downstream 0.5kb downstream 500 false Chr10: 1964595-1965094 Eucalyptus grandis
Eucgr.J00190 1.0kb upstream 1.0kb upstream 3339 true Chr10: 1965095-1968433 Eucalyptus grandis
Eucgr.J00190 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1967434-1968433 Eucalyptus grandis
Eucgr.J00190 1.0kb downstream 1.0kb downstream 3339 true Chr10: 1964095-1967433 Eucalyptus grandis
Eucgr.J00190 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1964095-1965094 Eucalyptus grandis
Eucgr.J00190 2.0kb upstream 2.0kb upstream 4339 true Chr10: 1965095-1969433 Eucalyptus grandis
Eucgr.J00190 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1967434-1969433 Eucalyptus grandis
Eucgr.J00190 2.0kb downstream 2.0kb downstream 4339 true Chr10: 1963095-1967433 Eucalyptus grandis
Eucgr.J00190 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1963095-1965094 Eucalyptus grandis
Eucgr.J00190 5.0kb upstream 5.0kb upstream 7339 true Chr10: 1965095-1972433 Eucalyptus grandis
Eucgr.J00190 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1967434-1972433 Eucalyptus grandis
Eucgr.J00190 5.0kb downstream 5.0kb downstream 7339 true Chr10: 1960095-1967433 Eucalyptus grandis
Eucgr.J00190 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1960095-1965094 Eucalyptus grandis
Eucgr.J00190 10.0kb upstream 10.0kb upstream 12339 true Chr10: 1965095-1977433 Eucalyptus grandis
Eucgr.J00190 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1967434-1977433 Eucalyptus grandis
Eucgr.J00190 10.0kb downstream 10.0kb downstream 12339 true Chr10: 1955095-1967433 Eucalyptus grandis
Eucgr.J00190 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1955095-1965094 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063256 5270 Rosid View MSA
123736392 5271 Pentapetalae View MSA
122786016 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8172 0.0 50.7129    
cufflinks 2.14914 0.0 5.78052    
cufflinks 30.6268 0.0 67.7758 High High
cufflinks 1.12845 0.0 3.26287   Low
cufflinks 2.09915 0.0 5.66896    
cufflinks 9.75394 0.0 22.7915    

0 Strain