Gene : Eucgr.J00153 E. grandis v2.0
Defline:  (1 of 1) PTHR14211 - GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2 Genomic Order:  134
Name:  ? Eucgr.J00153 Secondary Identifier:  ? PAC:32034264
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00153 0.5kb upstream 0.5kb upstream 8286 true Chr10: 1692733-1701018 Eucalyptus grandis
Eucgr.J00153 0.5kb upstream 0.5kb upstream 500 false Chr10: 1692733-1693232 Eucalyptus grandis
Eucgr.J00153 0.5kb downstream 0.5kb downstream 8286 true Chr10: 1693233-1701518 Eucalyptus grandis
Eucgr.J00153 0.5kb downstream 0.5kb downstream 500 false Chr10: 1701019-1701518 Eucalyptus grandis
Eucgr.J00153 1.0kb upstream 1.0kb upstream 8786 true Chr10: 1692233-1701018 Eucalyptus grandis
Eucgr.J00153 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1692233-1693232 Eucalyptus grandis
Eucgr.J00153 1.0kb downstream 1.0kb downstream 8786 true Chr10: 1693233-1702018 Eucalyptus grandis
Eucgr.J00153 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1701019-1702018 Eucalyptus grandis
Eucgr.J00153 2.0kb upstream 2.0kb upstream 9786 true Chr10: 1691233-1701018 Eucalyptus grandis
Eucgr.J00153 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1691233-1693232 Eucalyptus grandis
Eucgr.J00153 2.0kb downstream 2.0kb downstream 9786 true Chr10: 1693233-1703018 Eucalyptus grandis
Eucgr.J00153 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1701019-1703018 Eucalyptus grandis
Eucgr.J00153 5.0kb upstream 5.0kb upstream 12786 true Chr10: 1688233-1701018 Eucalyptus grandis
Eucgr.J00153 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1688233-1693232 Eucalyptus grandis
Eucgr.J00153 5.0kb downstream 5.0kb downstream 12786 true Chr10: 1693233-1706018 Eucalyptus grandis
Eucgr.J00153 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1701019-1706018 Eucalyptus grandis
Eucgr.J00153 10.0kb upstream 10.0kb upstream 17786 true Chr10: 1683233-1701018 Eucalyptus grandis
Eucgr.J00153 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1683233-1693232 Eucalyptus grandis
Eucgr.J00153 10.0kb downstream 10.0kb downstream 17786 true Chr10: 1693233-1711018 Eucalyptus grandis
Eucgr.J00153 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1701019-1711018 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069341 5270 Rosid View MSA
123739038 5271 Pentapetalae View MSA
122792577 5272 Eudicot View MSA
122046811 5273 Angiosperm View MSA
121347392 5274 Embryophyte View MSA
123425995 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.0307 0.0 122.351 High High
cufflinks 10.3934 0.0 25.3289   Low
cufflinks 28.1289 0.0 98.4866 High  
cufflinks 15.6045 0.0 47.485    
cufflinks 11.4822 0.0 34.5616    
cufflinks 28.7331 0.0 79.1724    

0 Strain