Gene : Eucgr.J00161 E. grandis v2.0
Defline:  (1 of 4) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Genomic Order:  142
Name:  ? Eucgr.J00161 Secondary Identifier:  ? PAC:32032981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00161 0.5kb upstream 0.5kb upstream 3568 true Chr10: 1750397-1753964 Eucalyptus grandis
Eucgr.J00161 0.5kb upstream 0.5kb upstream 500 false Chr10: 1753465-1753964 Eucalyptus grandis
Eucgr.J00161 0.5kb downstream 0.5kb downstream 3568 true Chr10: 1749897-1753464 Eucalyptus grandis
Eucgr.J00161 0.5kb downstream 0.5kb downstream 500 false Chr10: 1749897-1750396 Eucalyptus grandis
Eucgr.J00161 1.0kb upstream 1.0kb upstream 4068 true Chr10: 1750397-1754464 Eucalyptus grandis
Eucgr.J00161 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1753465-1754464 Eucalyptus grandis
Eucgr.J00161 1.0kb downstream 1.0kb downstream 4068 true Chr10: 1749397-1753464 Eucalyptus grandis
Eucgr.J00161 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1749397-1750396 Eucalyptus grandis
Eucgr.J00161 2.0kb upstream 2.0kb upstream 5068 true Chr10: 1750397-1755464 Eucalyptus grandis
Eucgr.J00161 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1753465-1755464 Eucalyptus grandis
Eucgr.J00161 2.0kb downstream 2.0kb downstream 5068 true Chr10: 1748397-1753464 Eucalyptus grandis
Eucgr.J00161 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1748397-1750396 Eucalyptus grandis
Eucgr.J00161 5.0kb upstream 5.0kb upstream 8068 true Chr10: 1750397-1758464 Eucalyptus grandis
Eucgr.J00161 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1753465-1758464 Eucalyptus grandis
Eucgr.J00161 5.0kb downstream 5.0kb downstream 8068 true Chr10: 1745397-1753464 Eucalyptus grandis
Eucgr.J00161 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1745397-1750396 Eucalyptus grandis
Eucgr.J00161 10.0kb upstream 10.0kb upstream 13068 true Chr10: 1750397-1763464 Eucalyptus grandis
Eucgr.J00161 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1753465-1763464 Eucalyptus grandis
Eucgr.J00161 10.0kb downstream 10.0kb downstream 13068 true Chr10: 1740397-1753464 Eucalyptus grandis
Eucgr.J00161 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1740397-1750396 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062964 5270 Rosid View MSA
123736698 5271 Pentapetalae View MSA
122792401 5272 Eudicot View MSA
122046760 5273 Angiosperm View MSA
121347603 5274 Embryophyte View MSA
123428455 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.46298 0.0 17.8822    
cufflinks 0.706194 0.0 2.16514 Low Low
cufflinks 22.3921 0.0 49.8753    
cufflinks 5.63134 0.0 13.8892    
cufflinks 40.5158 0.0 89.6214 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain