Gene : Eucgr.J00138 E. grandis v2.0
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  122
Name:  ? Eucgr.J00138 Secondary Identifier:  ? PAC:32033057
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00138 0.5kb upstream 0.5kb upstream 2784 true Chr10: 1623091-1625874 Eucalyptus grandis
Eucgr.J00138 0.5kb upstream 0.5kb upstream 500 false Chr10: 1623091-1623590 Eucalyptus grandis
Eucgr.J00138 0.5kb downstream 0.5kb downstream 2784 true Chr10: 1623591-1626374 Eucalyptus grandis
Eucgr.J00138 0.5kb downstream 0.5kb downstream 500 false Chr10: 1625875-1626374 Eucalyptus grandis
Eucgr.J00138 1.0kb upstream 1.0kb upstream 3284 true Chr10: 1622591-1625874 Eucalyptus grandis
Eucgr.J00138 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1622591-1623590 Eucalyptus grandis
Eucgr.J00138 1.0kb downstream 1.0kb downstream 3284 true Chr10: 1623591-1626874 Eucalyptus grandis
Eucgr.J00138 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1625875-1626874 Eucalyptus grandis
Eucgr.J00138 2.0kb upstream 2.0kb upstream 4284 true Chr10: 1621591-1625874 Eucalyptus grandis
Eucgr.J00138 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1621591-1623590 Eucalyptus grandis
Eucgr.J00138 2.0kb downstream 2.0kb downstream 4284 true Chr10: 1623591-1627874 Eucalyptus grandis
Eucgr.J00138 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1625875-1627874 Eucalyptus grandis
Eucgr.J00138 5.0kb upstream 5.0kb upstream 7284 true Chr10: 1618591-1625874 Eucalyptus grandis
Eucgr.J00138 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1618591-1623590 Eucalyptus grandis
Eucgr.J00138 5.0kb downstream 5.0kb downstream 7284 true Chr10: 1623591-1630874 Eucalyptus grandis
Eucgr.J00138 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1625875-1630874 Eucalyptus grandis
Eucgr.J00138 10.0kb upstream 10.0kb upstream 12284 true Chr10: 1613591-1625874 Eucalyptus grandis
Eucgr.J00138 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1613591-1623590 Eucalyptus grandis
Eucgr.J00138 10.0kb downstream 10.0kb downstream 12284 true Chr10: 1623591-1635874 Eucalyptus grandis
Eucgr.J00138 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1625875-1635874 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074113 5270 Rosid View MSA
123752878 5271 Pentapetalae View MSA
122786642 5272 Eudicot View MSA
122047536 5273 Angiosperm View MSA
123429159 5275 Viridiplantae View MSA
121351417 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.271023 0.0 1.01343 Low Low
cufflinks 12.9949 0.0 31.1411   High
cufflinks 0.272218 0.0 1.02042 Low Low
cufflinks 10.4221 0.0 25.6886    
cufflinks 3.36934 0.0 9.23955    
cufflinks 3.45305 0.0 9.48791    

0 Strain