Gene : Eucgr.J00146 E. grandis v2.0
Defline:  (1 of 76) PF00892 - EamA-like transporter family (EamA) Genomic Order:  128
Name:  ? Eucgr.J00146 Secondary Identifier:  ? PAC:32035167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00146 0.5kb upstream 0.5kb upstream 4737 true Chr10: 1656084-1660820 Eucalyptus grandis
Eucgr.J00146 0.5kb upstream 0.5kb upstream 500 false Chr10: 1656084-1656583 Eucalyptus grandis
Eucgr.J00146 0.5kb downstream 0.5kb downstream 4737 true Chr10: 1656584-1661320 Eucalyptus grandis
Eucgr.J00146 0.5kb downstream 0.5kb downstream 500 false Chr10: 1660821-1661320 Eucalyptus grandis
Eucgr.J00146 1.0kb upstream 1.0kb upstream 5237 true Chr10: 1655584-1660820 Eucalyptus grandis
Eucgr.J00146 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1655584-1656583 Eucalyptus grandis
Eucgr.J00146 1.0kb downstream 1.0kb downstream 5237 true Chr10: 1656584-1661820 Eucalyptus grandis
Eucgr.J00146 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1660821-1661820 Eucalyptus grandis
Eucgr.J00146 2.0kb upstream 2.0kb upstream 6237 true Chr10: 1654584-1660820 Eucalyptus grandis
Eucgr.J00146 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1654584-1656583 Eucalyptus grandis
Eucgr.J00146 2.0kb downstream 2.0kb downstream 6237 true Chr10: 1656584-1662820 Eucalyptus grandis
Eucgr.J00146 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1660821-1662820 Eucalyptus grandis
Eucgr.J00146 5.0kb upstream 5.0kb upstream 9237 true Chr10: 1651584-1660820 Eucalyptus grandis
Eucgr.J00146 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1651584-1656583 Eucalyptus grandis
Eucgr.J00146 5.0kb downstream 5.0kb downstream 9237 true Chr10: 1656584-1665820 Eucalyptus grandis
Eucgr.J00146 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1660821-1665820 Eucalyptus grandis
Eucgr.J00146 10.0kb upstream 10.0kb upstream 14237 true Chr10: 1646584-1660820 Eucalyptus grandis
Eucgr.J00146 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1646584-1656583 Eucalyptus grandis
Eucgr.J00146 10.0kb downstream 10.0kb downstream 14237 true Chr10: 1656584-1670820 Eucalyptus grandis
Eucgr.J00146 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1660821-1670820 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121673037 5273 Angiosperm View MSA
124072839 5270 Rosid View MSA
123628206 5271 Pentapetalae View MSA
122662495 5272 Eudicot View MSA
120944939 5274 Embryophyte View MSA
122985345 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.74848 0.0 8.44468    
cufflinks 5.78217 0.0 13.2995    
cufflinks 5.80261 0.0 15.7611    
cufflinks 1.15084 0.0 4.17782   Low
cufflinks 2.48683 0.0 6.29513    
cufflinks 15.9992 0.0 36.0041   High

0 Strain