Gene : Eucgr.J00119 E. grandis v2.0
Defline:  (1 of 56) PF00170 - bZIP transcription factor (bZIP_1) Genomic Order:  104
Name:  ? Eucgr.J00119 Secondary Identifier:  ? PAC:32032239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00119 0.5kb upstream 0.5kb upstream 4070 true Chr10: 1483355-1487424 Eucalyptus grandis
Eucgr.J00119 0.5kb upstream 0.5kb upstream 500 false Chr10: 1483355-1483854 Eucalyptus grandis
Eucgr.J00119 0.5kb downstream 0.5kb downstream 4070 true Chr10: 1483855-1487924 Eucalyptus grandis
Eucgr.J00119 0.5kb downstream 0.5kb downstream 500 false Chr10: 1487425-1487924 Eucalyptus grandis
Eucgr.J00119 1.0kb upstream 1.0kb upstream 4570 true Chr10: 1482855-1487424 Eucalyptus grandis
Eucgr.J00119 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1482855-1483854 Eucalyptus grandis
Eucgr.J00119 1.0kb downstream 1.0kb downstream 4570 true Chr10: 1483855-1488424 Eucalyptus grandis
Eucgr.J00119 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1487425-1488424 Eucalyptus grandis
Eucgr.J00119 2.0kb upstream 2.0kb upstream 5570 true Chr10: 1481855-1487424 Eucalyptus grandis
Eucgr.J00119 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1481855-1483854 Eucalyptus grandis
Eucgr.J00119 2.0kb downstream 2.0kb downstream 5570 true Chr10: 1483855-1489424 Eucalyptus grandis
Eucgr.J00119 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1487425-1489424 Eucalyptus grandis
Eucgr.J00119 5.0kb upstream 5.0kb upstream 8570 true Chr10: 1478855-1487424 Eucalyptus grandis
Eucgr.J00119 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1478855-1483854 Eucalyptus grandis
Eucgr.J00119 5.0kb downstream 5.0kb downstream 8570 true Chr10: 1483855-1492424 Eucalyptus grandis
Eucgr.J00119 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1487425-1492424 Eucalyptus grandis
Eucgr.J00119 10.0kb upstream 10.0kb upstream 13570 true Chr10: 1473855-1487424 Eucalyptus grandis
Eucgr.J00119 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1473855-1483854 Eucalyptus grandis
Eucgr.J00119 10.0kb downstream 10.0kb downstream 13570 true Chr10: 1483855-1497424 Eucalyptus grandis
Eucgr.J00119 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1487425-1497424 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121659391 5273 Angiosperm Singleton cluster - no MSA
124043610 5270 Rosid Singleton cluster - no MSA
123613702 5271 Pentapetalae Singleton cluster - no MSA
122648177 5272 Eudicot Singleton cluster - no MSA
120931360 5274 Embryophyte Singleton cluster - no MSA
122971852 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3148 0.0 24.0943   High
cufflinks 2.47571 0.0 6.65891   Low
cufflinks 6.7544 0.0 16.4797    
cufflinks 3.01886 0.0 7.99496    
cufflinks 2.72408 0.0 7.26112    
cufflinks 9.45775 0.0 22.1918   High

0 Strain