Gene : Eucgr.J00120 E. grandis v2.0
Defline:  (1 of 3) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  105
Name:  ? Eucgr.J00120 Secondary Identifier:  ? PAC:32034708
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00120 0.5kb upstream 0.5kb upstream 2154 true Chr10: 1491936-1494089 Eucalyptus grandis
Eucgr.J00120 0.5kb upstream 0.5kb upstream 500 false Chr10: 1491936-1492435 Eucalyptus grandis
Eucgr.J00120 0.5kb downstream 0.5kb downstream 2154 true Chr10: 1492436-1494589 Eucalyptus grandis
Eucgr.J00120 0.5kb downstream 0.5kb downstream 500 false Chr10: 1494090-1494589 Eucalyptus grandis
Eucgr.J00120 1.0kb upstream 1.0kb upstream 2654 true Chr10: 1491436-1494089 Eucalyptus grandis
Eucgr.J00120 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1491436-1492435 Eucalyptus grandis
Eucgr.J00120 1.0kb downstream 1.0kb downstream 2654 true Chr10: 1492436-1495089 Eucalyptus grandis
Eucgr.J00120 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1494090-1495089 Eucalyptus grandis
Eucgr.J00120 2.0kb upstream 2.0kb upstream 3654 true Chr10: 1490436-1494089 Eucalyptus grandis
Eucgr.J00120 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1490436-1492435 Eucalyptus grandis
Eucgr.J00120 2.0kb downstream 2.0kb downstream 3654 true Chr10: 1492436-1496089 Eucalyptus grandis
Eucgr.J00120 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1494090-1496089 Eucalyptus grandis
Eucgr.J00120 5.0kb upstream 5.0kb upstream 6654 true Chr10: 1487436-1494089 Eucalyptus grandis
Eucgr.J00120 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1487436-1492435 Eucalyptus grandis
Eucgr.J00120 5.0kb downstream 5.0kb downstream 6654 true Chr10: 1492436-1499089 Eucalyptus grandis
Eucgr.J00120 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1494090-1499089 Eucalyptus grandis
Eucgr.J00120 10.0kb upstream 10.0kb upstream 11654 true Chr10: 1482436-1494089 Eucalyptus grandis
Eucgr.J00120 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1482436-1492435 Eucalyptus grandis
Eucgr.J00120 10.0kb downstream 10.0kb downstream 11654 true Chr10: 1492436-1504089 Eucalyptus grandis
Eucgr.J00120 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1494090-1504089 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.9663 0.0 110.575 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 18.1838 0.0 41.211   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 34.2055 0.0 75.7655 High  

0 Strain