Gene : Eucgr.J00122 E. grandis v2.0
Defline:  (1 of 1) PTHR10994:SF67 - RETICULON-LIKE PROTEIN B16 Genomic Order:  107
Name:  ? Eucgr.J00122 Secondary Identifier:  ? PAC:32032373
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00122 0.5kb upstream 0.5kb upstream 4492 true Chr10: 1499608-1504099 Eucalyptus grandis
Eucgr.J00122 0.5kb upstream 0.5kb upstream 500 false Chr10: 1503600-1504099 Eucalyptus grandis
Eucgr.J00122 0.5kb downstream 0.5kb downstream 4492 true Chr10: 1499108-1503599 Eucalyptus grandis
Eucgr.J00122 0.5kb downstream 0.5kb downstream 500 false Chr10: 1499108-1499607 Eucalyptus grandis
Eucgr.J00122 1.0kb upstream 1.0kb upstream 4992 true Chr10: 1499608-1504599 Eucalyptus grandis
Eucgr.J00122 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1503600-1504599 Eucalyptus grandis
Eucgr.J00122 1.0kb downstream 1.0kb downstream 4992 true Chr10: 1498608-1503599 Eucalyptus grandis
Eucgr.J00122 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1498608-1499607 Eucalyptus grandis
Eucgr.J00122 2.0kb upstream 2.0kb upstream 5992 true Chr10: 1499608-1505599 Eucalyptus grandis
Eucgr.J00122 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1503600-1505599 Eucalyptus grandis
Eucgr.J00122 2.0kb downstream 2.0kb downstream 5992 true Chr10: 1497608-1503599 Eucalyptus grandis
Eucgr.J00122 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1497608-1499607 Eucalyptus grandis
Eucgr.J00122 5.0kb upstream 5.0kb upstream 8992 true Chr10: 1499608-1508599 Eucalyptus grandis
Eucgr.J00122 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1503600-1508599 Eucalyptus grandis
Eucgr.J00122 5.0kb downstream 5.0kb downstream 8992 true Chr10: 1494608-1503599 Eucalyptus grandis
Eucgr.J00122 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1494608-1499607 Eucalyptus grandis
Eucgr.J00122 10.0kb upstream 10.0kb upstream 13992 true Chr10: 1499608-1513599 Eucalyptus grandis
Eucgr.J00122 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1503600-1513599 Eucalyptus grandis
Eucgr.J00122 10.0kb downstream 10.0kb downstream 13992 true Chr10: 1489608-1503599 Eucalyptus grandis
Eucgr.J00122 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1489608-1499607 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050388 5270 Rosid View MSA
123750522 5271 Pentapetalae View MSA
122793099 5272 Eudicot View MSA
122047418 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1721 0.0 59.35    
cufflinks 30.0533 0.0 67.7288   High
cufflinks 19.2865 0.0 44.2193    
cufflinks 17.1952 0.0 40.6097    
cufflinks 24.4532 0.0 55.9377    
cufflinks 14.8921 0.0 34.6027   Low

0 Strain