Gene : Eucgr.J00112 E. grandis v2.0
Defline:  (1 of 1) PTHR33644:SF3 - U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED Genomic Order:  98
Name:  ? Eucgr.J00112 Secondary Identifier:  ? PAC:32034077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00112 0.5kb upstream 0.5kb upstream 5470 true Chr10: 1431812-1437281 Eucalyptus grandis
Eucgr.J00112 0.5kb upstream 0.5kb upstream 500 false Chr10: 1431812-1432311 Eucalyptus grandis
Eucgr.J00112 0.5kb downstream 0.5kb downstream 5470 true Chr10: 1432312-1437781 Eucalyptus grandis
Eucgr.J00112 0.5kb downstream 0.5kb downstream 500 false Chr10: 1437282-1437781 Eucalyptus grandis
Eucgr.J00112 1.0kb upstream 1.0kb upstream 5970 true Chr10: 1431312-1437281 Eucalyptus grandis
Eucgr.J00112 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1431312-1432311 Eucalyptus grandis
Eucgr.J00112 1.0kb downstream 1.0kb downstream 5970 true Chr10: 1432312-1438281 Eucalyptus grandis
Eucgr.J00112 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1437282-1438281 Eucalyptus grandis
Eucgr.J00112 2.0kb upstream 2.0kb upstream 6970 true Chr10: 1430312-1437281 Eucalyptus grandis
Eucgr.J00112 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1430312-1432311 Eucalyptus grandis
Eucgr.J00112 2.0kb downstream 2.0kb downstream 6970 true Chr10: 1432312-1439281 Eucalyptus grandis
Eucgr.J00112 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1437282-1439281 Eucalyptus grandis
Eucgr.J00112 5.0kb upstream 5.0kb upstream 9970 true Chr10: 1427312-1437281 Eucalyptus grandis
Eucgr.J00112 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1427312-1432311 Eucalyptus grandis
Eucgr.J00112 5.0kb downstream 5.0kb downstream 9970 true Chr10: 1432312-1442281 Eucalyptus grandis
Eucgr.J00112 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1437282-1442281 Eucalyptus grandis
Eucgr.J00112 10.0kb upstream 10.0kb upstream 14970 true Chr10: 1422312-1437281 Eucalyptus grandis
Eucgr.J00112 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1422312-1432311 Eucalyptus grandis
Eucgr.J00112 10.0kb downstream 10.0kb downstream 14970 true Chr10: 1432312-1447281 Eucalyptus grandis
Eucgr.J00112 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1437282-1447281 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067678 5270 Rosid View MSA
123739298 5271 Pentapetalae View MSA
122793350 5272 Eudicot View MSA
122045751 5273 Angiosperm View MSA
121348831 5274 Embryophyte View MSA
123381033 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8733 0.0 31.6871    
cufflinks 11.7554 0.0 32.6161    
cufflinks 15.9922 0.0 44.2809    
cufflinks 8.34073 0.0 22.5795   Low
cufflinks 15.9568 0.0 36.1596    
cufflinks 12.2034 0.0 33.579    

0 Strain