Gene : Eucgr.J00041 E. grandis v2.0
Defline:  (1 of 1) PTHR11946:SF89 - METHIONYL-TRNA SYNTHETASE Genomic Order:  36
Name:  ? Eucgr.J00041 Secondary Identifier:  ? PAC:32033991
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00041 0.5kb upstream 0.5kb upstream 7832 true Chr10: 675537-683368 Eucalyptus grandis
Eucgr.J00041 0.5kb upstream 0.5kb upstream 500 false Chr10: 682869-683368 Eucalyptus grandis
Eucgr.J00041 0.5kb downstream 0.5kb downstream 7832 true Chr10: 675037-682868 Eucalyptus grandis
Eucgr.J00041 0.5kb downstream 0.5kb downstream 500 false Chr10: 675037-675536 Eucalyptus grandis
Eucgr.J00041 1.0kb upstream 1.0kb upstream 8332 true Chr10: 675537-683868 Eucalyptus grandis
Eucgr.J00041 1.0kb upstream 1.0kb upstream 1000 false Chr10: 682869-683868 Eucalyptus grandis
Eucgr.J00041 1.0kb downstream 1.0kb downstream 8332 true Chr10: 674537-682868 Eucalyptus grandis
Eucgr.J00041 1.0kb downstream 1.0kb downstream 1000 false Chr10: 674537-675536 Eucalyptus grandis
Eucgr.J00041 2.0kb upstream 2.0kb upstream 9332 true Chr10: 675537-684868 Eucalyptus grandis
Eucgr.J00041 2.0kb upstream 2.0kb upstream 2000 false Chr10: 682869-684868 Eucalyptus grandis
Eucgr.J00041 2.0kb downstream 2.0kb downstream 9332 true Chr10: 673537-682868 Eucalyptus grandis
Eucgr.J00041 2.0kb downstream 2.0kb downstream 2000 false Chr10: 673537-675536 Eucalyptus grandis
Eucgr.J00041 5.0kb upstream 5.0kb upstream 12332 true Chr10: 675537-687868 Eucalyptus grandis
Eucgr.J00041 5.0kb upstream 5.0kb upstream 5000 false Chr10: 682869-687868 Eucalyptus grandis
Eucgr.J00041 5.0kb downstream 5.0kb downstream 12332 true Chr10: 670537-682868 Eucalyptus grandis
Eucgr.J00041 5.0kb downstream 5.0kb downstream 5000 false Chr10: 670537-675536 Eucalyptus grandis
Eucgr.J00041 10.0kb upstream 10.0kb upstream 17332 true Chr10: 675537-692868 Eucalyptus grandis
Eucgr.J00041 10.0kb upstream 10.0kb upstream 10000 false Chr10: 682869-692868 Eucalyptus grandis
Eucgr.J00041 10.0kb downstream 10.0kb downstream 17332 true Chr10: 665537-682868 Eucalyptus grandis
Eucgr.J00041 10.0kb downstream 10.0kb downstream 10000 false Chr10: 665537-675536 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065458 5270 Rosid View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.62156 0.0 15.4135    
cufflinks 1.39111 0.0 4.05906    
cufflinks 6.01177 0.0 18.9815    
cufflinks 0.728373 0.0 2.29162   Low
cufflinks 1.56155 0.0 4.39602    
cufflinks 9.95243 0.0 27.0178   High

0 Strain