Gene : Eucgr.J00035 E. grandis v2.0
Defline:  (1 of 2) PTHR10744//PTHR10744:SF10 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER Genomic Order:  31
Name:  ? Eucgr.J00035 Secondary Identifier:  ? PAC:32034748
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00035 0.5kb upstream 0.5kb upstream 3363 true Chr10: 614077-617439 Eucalyptus grandis
Eucgr.J00035 0.5kb upstream 0.5kb upstream 500 false Chr10: 614077-614576 Eucalyptus grandis
Eucgr.J00035 0.5kb downstream 0.5kb downstream 3363 true Chr10: 614577-617939 Eucalyptus grandis
Eucgr.J00035 0.5kb downstream 0.5kb downstream 500 false Chr10: 617440-617939 Eucalyptus grandis
Eucgr.J00035 1.0kb upstream 1.0kb upstream 3863 true Chr10: 613577-617439 Eucalyptus grandis
Eucgr.J00035 1.0kb upstream 1.0kb upstream 1000 false Chr10: 613577-614576 Eucalyptus grandis
Eucgr.J00035 1.0kb downstream 1.0kb downstream 3863 true Chr10: 614577-618439 Eucalyptus grandis
Eucgr.J00035 1.0kb downstream 1.0kb downstream 1000 false Chr10: 617440-618439 Eucalyptus grandis
Eucgr.J00035 2.0kb upstream 2.0kb upstream 4863 true Chr10: 612577-617439 Eucalyptus grandis
Eucgr.J00035 2.0kb upstream 2.0kb upstream 2000 false Chr10: 612577-614576 Eucalyptus grandis
Eucgr.J00035 2.0kb downstream 2.0kb downstream 4863 true Chr10: 614577-619439 Eucalyptus grandis
Eucgr.J00035 2.0kb downstream 2.0kb downstream 2000 false Chr10: 617440-619439 Eucalyptus grandis
Eucgr.J00035 5.0kb upstream 5.0kb upstream 7863 true Chr10: 609577-617439 Eucalyptus grandis
Eucgr.J00035 5.0kb upstream 5.0kb upstream 5000 false Chr10: 609577-614576 Eucalyptus grandis
Eucgr.J00035 5.0kb downstream 5.0kb downstream 7863 true Chr10: 614577-622439 Eucalyptus grandis
Eucgr.J00035 5.0kb downstream 5.0kb downstream 5000 false Chr10: 617440-622439 Eucalyptus grandis
Eucgr.J00035 10.0kb upstream 10.0kb upstream 12863 true Chr10: 604577-617439 Eucalyptus grandis
Eucgr.J00035 10.0kb upstream 10.0kb upstream 10000 false Chr10: 604577-614576 Eucalyptus grandis
Eucgr.J00035 10.0kb downstream 10.0kb downstream 12863 true Chr10: 614577-627439 Eucalyptus grandis
Eucgr.J00035 10.0kb downstream 10.0kb downstream 10000 false Chr10: 617440-627439 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061997 5270 Rosid View MSA
123740255 5271 Pentapetalae View MSA
122794687 5272 Eudicot View MSA
122044220 5273 Angiosperm View MSA
121344694 5274 Embryophyte View MSA
123428242 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.1082 0.0 120.382 High  
cufflinks 25.864 0.0 61.7873   Low
cufflinks 42.6734 0.0 96.7259 High  
cufflinks 46.6597 0.0 113.696 High  
cufflinks 43.901 0.0 99.3562 High  
cufflinks 36.7848 0.0 84.5352 High  

0 Strain