Gene : Eucgr.J00011 E. grandis v2.0
Defline:  (1 of 1) PTHR12772 - DNA REPLICATION COMPLEX GINS PROTEIN PSF2 Genomic Order:  9
Name:  ? Eucgr.J00011 Secondary Identifier:  ? PAC:32032573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00011 0.5kb upstream 0.5kb upstream 4639 true Chr10: 184073-188711 Eucalyptus grandis
Eucgr.J00011 0.5kb upstream 0.5kb upstream 500 false Chr10: 184073-184572 Eucalyptus grandis
Eucgr.J00011 0.5kb downstream 0.5kb downstream 4639 true Chr10: 184573-189211 Eucalyptus grandis
Eucgr.J00011 0.5kb downstream 0.5kb downstream 500 false Chr10: 188712-189211 Eucalyptus grandis
Eucgr.J00011 1.0kb upstream 1.0kb upstream 5139 true Chr10: 183573-188711 Eucalyptus grandis
Eucgr.J00011 1.0kb upstream 1.0kb upstream 1000 false Chr10: 183573-184572 Eucalyptus grandis
Eucgr.J00011 1.0kb downstream 1.0kb downstream 5139 true Chr10: 184573-189711 Eucalyptus grandis
Eucgr.J00011 1.0kb downstream 1.0kb downstream 1000 false Chr10: 188712-189711 Eucalyptus grandis
Eucgr.J00011 2.0kb upstream 2.0kb upstream 6139 true Chr10: 182573-188711 Eucalyptus grandis
Eucgr.J00011 2.0kb upstream 2.0kb upstream 2000 false Chr10: 182573-184572 Eucalyptus grandis
Eucgr.J00011 2.0kb downstream 2.0kb downstream 6139 true Chr10: 184573-190711 Eucalyptus grandis
Eucgr.J00011 2.0kb downstream 2.0kb downstream 2000 false Chr10: 188712-190711 Eucalyptus grandis
Eucgr.J00011 5.0kb upstream 5.0kb upstream 9139 true Chr10: 179573-188711 Eucalyptus grandis
Eucgr.J00011 5.0kb upstream 5.0kb upstream 5000 false Chr10: 179573-184572 Eucalyptus grandis
Eucgr.J00011 5.0kb downstream 5.0kb downstream 9139 true Chr10: 184573-193711 Eucalyptus grandis
Eucgr.J00011 5.0kb downstream 5.0kb downstream 5000 false Chr10: 188712-193711 Eucalyptus grandis
Eucgr.J00011 10.0kb upstream 10.0kb upstream 14139 true Chr10: 174573-188711 Eucalyptus grandis
Eucgr.J00011 10.0kb upstream 10.0kb upstream 10000 false Chr10: 174573-184572 Eucalyptus grandis
Eucgr.J00011 10.0kb downstream 10.0kb downstream 14139 true Chr10: 184573-198711 Eucalyptus grandis
Eucgr.J00011 10.0kb downstream 10.0kb downstream 10000 false Chr10: 188712-198711 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122785658 5272 Eudicot View MSA
124064851 5270 Rosid View MSA
123738779 5271 Pentapetalae View MSA
122047700 5273 Angiosperm View MSA
121347474 5274 Embryophyte View MSA
123427862 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57266 0.0 9.69337    
cufflinks 4.56297 0.0 12.0571    
cufflinks 4.00023 0.0 10.7317    
cufflinks 1.19602 0.0 3.64713   Low
cufflinks 6.9031 0.0 17.5445   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain