Gene : Eucgr.J00697 E. grandis v2.0
Defline:  (1 of 1) PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 Genomic Order:  613
Name:  ? Eucgr.J00697 Secondary Identifier:  ? PAC:32032327
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00697 0.5kb upstream 0.5kb upstream 2444 true Chr10: 7446791-7449234 Eucalyptus grandis
Eucgr.J00697 0.5kb upstream 0.5kb upstream 500 false Chr10: 7448735-7449234 Eucalyptus grandis
Eucgr.J00697 0.5kb downstream 0.5kb downstream 2444 true Chr10: 7446291-7448734 Eucalyptus grandis
Eucgr.J00697 0.5kb downstream 0.5kb downstream 500 false Chr10: 7446291-7446790 Eucalyptus grandis
Eucgr.J00697 1.0kb upstream 1.0kb upstream 2944 true Chr10: 7446791-7449734 Eucalyptus grandis
Eucgr.J00697 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7448735-7449734 Eucalyptus grandis
Eucgr.J00697 1.0kb downstream 1.0kb downstream 2944 true Chr10: 7445791-7448734 Eucalyptus grandis
Eucgr.J00697 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7445791-7446790 Eucalyptus grandis
Eucgr.J00697 2.0kb upstream 2.0kb upstream 3944 true Chr10: 7446791-7450734 Eucalyptus grandis
Eucgr.J00697 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7448735-7450734 Eucalyptus grandis
Eucgr.J00697 2.0kb downstream 2.0kb downstream 3944 true Chr10: 7444791-7448734 Eucalyptus grandis
Eucgr.J00697 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7444791-7446790 Eucalyptus grandis
Eucgr.J00697 5.0kb upstream 5.0kb upstream 6944 true Chr10: 7446791-7453734 Eucalyptus grandis
Eucgr.J00697 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7448735-7453734 Eucalyptus grandis
Eucgr.J00697 5.0kb downstream 5.0kb downstream 6944 true Chr10: 7441791-7448734 Eucalyptus grandis
Eucgr.J00697 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7441791-7446790 Eucalyptus grandis
Eucgr.J00697 10.0kb upstream 10.0kb upstream 11944 true Chr10: 7446791-7458734 Eucalyptus grandis
Eucgr.J00697 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7448735-7458734 Eucalyptus grandis
Eucgr.J00697 10.0kb downstream 10.0kb downstream 11944 true Chr10: 7436791-7448734 Eucalyptus grandis
Eucgr.J00697 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7436791-7446790 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069167 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.35049 0.0 10.9126    
cufflinks 1.85967 0.0 5.11394    
cufflinks 13.992 0.0 31.8635   High
cufflinks 2.50832 0.0 6.7151    
cufflinks 4.3552 0.0 10.9856    
cufflinks 1.58069 0.0 4.34325   Low

0 Strain