Gene : Eucgr.J00702 E. grandis v2.0
Defline:  (1 of 2) PTHR22870:SF219 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN-RELATED Genomic Order:  618
Name:  ? Eucgr.J00702 Secondary Identifier:  ? PAC:32034261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00702 0.5kb upstream 0.5kb upstream 10419 true Chr10: 7501278-7511696 Eucalyptus grandis
Eucgr.J00702 0.5kb upstream 0.5kb upstream 500 false Chr10: 7501278-7501777 Eucalyptus grandis
Eucgr.J00702 0.5kb downstream 0.5kb downstream 10419 true Chr10: 7501778-7512196 Eucalyptus grandis
Eucgr.J00702 0.5kb downstream 0.5kb downstream 500 false Chr10: 7511697-7512196 Eucalyptus grandis
Eucgr.J00702 1.0kb upstream 1.0kb upstream 10919 true Chr10: 7500778-7511696 Eucalyptus grandis
Eucgr.J00702 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7500778-7501777 Eucalyptus grandis
Eucgr.J00702 1.0kb downstream 1.0kb downstream 10919 true Chr10: 7501778-7512696 Eucalyptus grandis
Eucgr.J00702 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7511697-7512696 Eucalyptus grandis
Eucgr.J00702 2.0kb upstream 2.0kb upstream 11919 true Chr10: 7499778-7511696 Eucalyptus grandis
Eucgr.J00702 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7499778-7501777 Eucalyptus grandis
Eucgr.J00702 2.0kb downstream 2.0kb downstream 11919 true Chr10: 7501778-7513696 Eucalyptus grandis
Eucgr.J00702 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7511697-7513696 Eucalyptus grandis
Eucgr.J00702 5.0kb upstream 5.0kb upstream 14919 true Chr10: 7496778-7511696 Eucalyptus grandis
Eucgr.J00702 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7496778-7501777 Eucalyptus grandis
Eucgr.J00702 5.0kb downstream 5.0kb downstream 14919 true Chr10: 7501778-7516696 Eucalyptus grandis
Eucgr.J00702 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7511697-7516696 Eucalyptus grandis
Eucgr.J00702 10.0kb upstream 10.0kb upstream 19919 true Chr10: 7491778-7511696 Eucalyptus grandis
Eucgr.J00702 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7491778-7501777 Eucalyptus grandis
Eucgr.J00702 10.0kb downstream 10.0kb downstream 19919 true Chr10: 7501778-7521696 Eucalyptus grandis
Eucgr.J00702 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7511697-7521696 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062866 5270 Rosid View MSA
123743329 5271 Pentapetalae View MSA
122789808 5272 Eudicot View MSA
122045930 5273 Angiosperm View MSA
121350863 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.82097 0.0 21.7433    
cufflinks 7.96147 0.0 17.6764    
cufflinks 8.42084 0.0 18.6779    
cufflinks 5.95063 0.0 13.3164   Low
cufflinks 7.36548 0.0 16.39    
cufflinks 12.8436 0.0 28.4054   High

0 Strain