Gene : Eucgr.J00673 E. grandis v2.0
Defline:  (1 of 1) PTHR23346:SF19 - PROTEASOME-ASSOCIATED PROTEIN ECM29 HOMOLOG Genomic Order:  590
Name:  ? Eucgr.J00673 Secondary Identifier:  ? PAC:32034567
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00673 0.5kb upstream 0.5kb upstream 25415 true Chr10: 7266413-7291827 Eucalyptus grandis
Eucgr.J00673 0.5kb upstream 0.5kb upstream 500 false Chr10: 7266413-7266912 Eucalyptus grandis
Eucgr.J00673 0.5kb downstream 0.5kb downstream 25415 true Chr10: 7266913-7292327 Eucalyptus grandis
Eucgr.J00673 0.5kb downstream 0.5kb downstream 500 false Chr10: 7291828-7292327 Eucalyptus grandis
Eucgr.J00673 1.0kb upstream 1.0kb upstream 25915 true Chr10: 7265913-7291827 Eucalyptus grandis
Eucgr.J00673 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7265913-7266912 Eucalyptus grandis
Eucgr.J00673 1.0kb downstream 1.0kb downstream 25915 true Chr10: 7266913-7292827 Eucalyptus grandis
Eucgr.J00673 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7291828-7292827 Eucalyptus grandis
Eucgr.J00673 2.0kb upstream 2.0kb upstream 26915 true Chr10: 7264913-7291827 Eucalyptus grandis
Eucgr.J00673 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7264913-7266912 Eucalyptus grandis
Eucgr.J00673 2.0kb downstream 2.0kb downstream 26915 true Chr10: 7266913-7293827 Eucalyptus grandis
Eucgr.J00673 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7291828-7293827 Eucalyptus grandis
Eucgr.J00673 5.0kb upstream 5.0kb upstream 29915 true Chr10: 7261913-7291827 Eucalyptus grandis
Eucgr.J00673 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7261913-7266912 Eucalyptus grandis
Eucgr.J00673 5.0kb downstream 5.0kb downstream 29915 true Chr10: 7266913-7296827 Eucalyptus grandis
Eucgr.J00673 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7291828-7296827 Eucalyptus grandis
Eucgr.J00673 10.0kb upstream 10.0kb upstream 34915 true Chr10: 7256913-7291827 Eucalyptus grandis
Eucgr.J00673 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7256913-7266912 Eucalyptus grandis
Eucgr.J00673 10.0kb downstream 10.0kb downstream 34915 true Chr10: 7266913-7301827 Eucalyptus grandis
Eucgr.J00673 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7291828-7301827 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060426 5270 Rosid View MSA
123740160 5271 Pentapetalae View MSA
122788135 5272 Eudicot View MSA
122042594 5273 Angiosperm View MSA
121344548 5274 Embryophyte View MSA
123425052 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.04363 0.0 20.001    
cufflinks 7.72769 0.0 17.0894   Low
cufflinks 8.44794 0.0 18.6829    
cufflinks 8.07843 0.0 17.8658    
cufflinks 8.11653 0.0 17.9493    
cufflinks 10.1988 0.0 22.563   High

0 Strain