Gene : Eucgr.J00682 E. grandis v2.0
Defline:  (1 of 2) 3.5.2.2 - Dihydropyrimidinase / Hydantoinase Genomic Order:  599
Name:  ? Eucgr.J00682 Secondary Identifier:  ? PAC:32035244
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3982 Eucalyptus grandis pathologic  
Egrandis PWY-6430 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00682 0.5kb upstream 0.5kb upstream 6516 true Chr10: 7336594-7343109 Eucalyptus grandis
Eucgr.J00682 0.5kb upstream 0.5kb upstream 500 false Chr10: 7336594-7337093 Eucalyptus grandis
Eucgr.J00682 0.5kb downstream 0.5kb downstream 6516 true Chr10: 7337094-7343609 Eucalyptus grandis
Eucgr.J00682 0.5kb downstream 0.5kb downstream 500 false Chr10: 7343110-7343609 Eucalyptus grandis
Eucgr.J00682 1.0kb upstream 1.0kb upstream 7016 true Chr10: 7336094-7343109 Eucalyptus grandis
Eucgr.J00682 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7336094-7337093 Eucalyptus grandis
Eucgr.J00682 1.0kb downstream 1.0kb downstream 7016 true Chr10: 7337094-7344109 Eucalyptus grandis
Eucgr.J00682 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7343110-7344109 Eucalyptus grandis
Eucgr.J00682 2.0kb upstream 2.0kb upstream 8016 true Chr10: 7335094-7343109 Eucalyptus grandis
Eucgr.J00682 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7335094-7337093 Eucalyptus grandis
Eucgr.J00682 2.0kb downstream 2.0kb downstream 8016 true Chr10: 7337094-7345109 Eucalyptus grandis
Eucgr.J00682 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7343110-7345109 Eucalyptus grandis
Eucgr.J00682 5.0kb upstream 5.0kb upstream 11016 true Chr10: 7332094-7343109 Eucalyptus grandis
Eucgr.J00682 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7332094-7337093 Eucalyptus grandis
Eucgr.J00682 5.0kb downstream 5.0kb downstream 11016 true Chr10: 7337094-7348109 Eucalyptus grandis
Eucgr.J00682 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7343110-7348109 Eucalyptus grandis
Eucgr.J00682 10.0kb upstream 10.0kb upstream 16016 true Chr10: 7327094-7343109 Eucalyptus grandis
Eucgr.J00682 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7327094-7337093 Eucalyptus grandis
Eucgr.J00682 10.0kb downstream 10.0kb downstream 16016 true Chr10: 7337094-7353109 Eucalyptus grandis
Eucgr.J00682 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7343110-7353109 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064802 5270 Rosid View MSA
123752945 5271 Pentapetalae View MSA
122786753 5272 Eudicot View MSA
122045027 5273 Angiosperm View MSA
121345970 5274 Embryophyte View MSA
123425044 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.4103 0.0 65.1641 High  
cufflinks 16.8516 0.0 37.3503    
cufflinks 50.449 0.0 114.003 High  
cufflinks 10.8683 0.0 24.3667    
cufflinks 11.2589 0.0 25.2436    
cufflinks 156.001 0.0 385.132 High High

0 Strain