Gene : Eucgr.J00623 E. grandis v2.0
Defline:  (1 of 1) PTHR21499:SF33 - HOMOSERINE DEHYDROGENASE Genomic Order:  546
Name:  ? Eucgr.J00623 Secondary Identifier:  ? PAC:32034319
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis HOMOSERSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3001 Eucalyptus grandis pathologic  
Egrandis THRESYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00623 0.5kb upstream 0.5kb upstream 6273 true Chr10: 6907197-6913469 Eucalyptus grandis
Eucgr.J00623 0.5kb upstream 0.5kb upstream 500 false Chr10: 6912970-6913469 Eucalyptus grandis
Eucgr.J00623 0.5kb downstream 0.5kb downstream 6273 true Chr10: 6906697-6912969 Eucalyptus grandis
Eucgr.J00623 0.5kb downstream 0.5kb downstream 500 false Chr10: 6906697-6907196 Eucalyptus grandis
Eucgr.J00623 1.0kb upstream 1.0kb upstream 6773 true Chr10: 6907197-6913969 Eucalyptus grandis
Eucgr.J00623 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6912970-6913969 Eucalyptus grandis
Eucgr.J00623 1.0kb downstream 1.0kb downstream 6773 true Chr10: 6906197-6912969 Eucalyptus grandis
Eucgr.J00623 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6906197-6907196 Eucalyptus grandis
Eucgr.J00623 2.0kb upstream 2.0kb upstream 7773 true Chr10: 6907197-6914969 Eucalyptus grandis
Eucgr.J00623 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6912970-6914969 Eucalyptus grandis
Eucgr.J00623 2.0kb downstream 2.0kb downstream 7773 true Chr10: 6905197-6912969 Eucalyptus grandis
Eucgr.J00623 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6905197-6907196 Eucalyptus grandis
Eucgr.J00623 5.0kb upstream 5.0kb upstream 10773 true Chr10: 6907197-6917969 Eucalyptus grandis
Eucgr.J00623 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6912970-6917969 Eucalyptus grandis
Eucgr.J00623 5.0kb downstream 5.0kb downstream 10773 true Chr10: 6902197-6912969 Eucalyptus grandis
Eucgr.J00623 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6902197-6907196 Eucalyptus grandis
Eucgr.J00623 10.0kb upstream 10.0kb upstream 15773 true Chr10: 6907197-6922969 Eucalyptus grandis
Eucgr.J00623 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6912970-6922969 Eucalyptus grandis
Eucgr.J00623 10.0kb downstream 10.0kb downstream 15773 true Chr10: 6897197-6912969 Eucalyptus grandis
Eucgr.J00623 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6897197-6907196 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.69113 0.0 15.9492    
cufflinks 5.67218 0.0 13.741   Low
cufflinks 7.24367 0.0 17.0706    
cufflinks 5.45352 0.0 13.1594   Low
cufflinks 7.96624 0.0 18.6646   High
cufflinks 7.83906 0.0 18.48    

0 Strain