Gene : Eucgr.J00626 E. grandis v2.0
Defline:  (1 of 1) PTHR20973 - NON-SMC ELEMENT 1-RELATED Genomic Order:  549
Name:  ? Eucgr.J00626 Secondary Identifier:  ? PAC:32035207
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00626 0.5kb upstream 0.5kb upstream 3423 true Chr10: 6929732-6933154 Eucalyptus grandis
Eucgr.J00626 0.5kb upstream 0.5kb upstream 500 false Chr10: 6929732-6930231 Eucalyptus grandis
Eucgr.J00626 0.5kb downstream 0.5kb downstream 3423 true Chr10: 6930232-6933654 Eucalyptus grandis
Eucgr.J00626 0.5kb downstream 0.5kb downstream 500 false Chr10: 6933155-6933654 Eucalyptus grandis
Eucgr.J00626 1.0kb upstream 1.0kb upstream 3923 true Chr10: 6929232-6933154 Eucalyptus grandis
Eucgr.J00626 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6929232-6930231 Eucalyptus grandis
Eucgr.J00626 1.0kb downstream 1.0kb downstream 3923 true Chr10: 6930232-6934154 Eucalyptus grandis
Eucgr.J00626 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6933155-6934154 Eucalyptus grandis
Eucgr.J00626 2.0kb upstream 2.0kb upstream 4923 true Chr10: 6928232-6933154 Eucalyptus grandis
Eucgr.J00626 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6928232-6930231 Eucalyptus grandis
Eucgr.J00626 2.0kb downstream 2.0kb downstream 4923 true Chr10: 6930232-6935154 Eucalyptus grandis
Eucgr.J00626 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6933155-6935154 Eucalyptus grandis
Eucgr.J00626 5.0kb upstream 5.0kb upstream 7923 true Chr10: 6925232-6933154 Eucalyptus grandis
Eucgr.J00626 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6925232-6930231 Eucalyptus grandis
Eucgr.J00626 5.0kb downstream 5.0kb downstream 7923 true Chr10: 6930232-6938154 Eucalyptus grandis
Eucgr.J00626 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6933155-6938154 Eucalyptus grandis
Eucgr.J00626 10.0kb upstream 10.0kb upstream 12923 true Chr10: 6920232-6933154 Eucalyptus grandis
Eucgr.J00626 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6920232-6930231 Eucalyptus grandis
Eucgr.J00626 10.0kb downstream 10.0kb downstream 12923 true Chr10: 6930232-6943154 Eucalyptus grandis
Eucgr.J00626 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6933155-6943154 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060843 5270 Rosid View MSA
123738022 5271 Pentapetalae View MSA
122793177 5272 Eudicot View MSA
122042015 5273 Angiosperm View MSA
121350451 5274 Embryophyte View MSA
123426397 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.65501 0.0 9.57818    
cufflinks 3.90273 0.0 10.1605    
cufflinks 4.36809 0.0 11.2661    
cufflinks 4.54569 0.0 11.6764    
cufflinks 2.33508 0.0 6.40337   Low
cufflinks 3.36889 0.0 8.89496    

0 Strain