Gene : Eucgr.J00628 E. grandis v2.0
Defline:  (1 of 2) PTHR31852:SF0 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  551
Name:  ? Eucgr.J00628 Secondary Identifier:  ? PAC:32033729
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00628 0.5kb upstream 0.5kb upstream 2270 true Chr10: 6941742-6944011 Eucalyptus grandis
Eucgr.J00628 0.5kb upstream 0.5kb upstream 500 false Chr10: 6943512-6944011 Eucalyptus grandis
Eucgr.J00628 0.5kb downstream 0.5kb downstream 2270 true Chr10: 6941242-6943511 Eucalyptus grandis
Eucgr.J00628 0.5kb downstream 0.5kb downstream 500 false Chr10: 6941242-6941741 Eucalyptus grandis
Eucgr.J00628 1.0kb upstream 1.0kb upstream 2770 true Chr10: 6941742-6944511 Eucalyptus grandis
Eucgr.J00628 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6943512-6944511 Eucalyptus grandis
Eucgr.J00628 1.0kb downstream 1.0kb downstream 2770 true Chr10: 6940742-6943511 Eucalyptus grandis
Eucgr.J00628 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6940742-6941741 Eucalyptus grandis
Eucgr.J00628 2.0kb upstream 2.0kb upstream 3770 true Chr10: 6941742-6945511 Eucalyptus grandis
Eucgr.J00628 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6943512-6945511 Eucalyptus grandis
Eucgr.J00628 2.0kb downstream 2.0kb downstream 3770 true Chr10: 6939742-6943511 Eucalyptus grandis
Eucgr.J00628 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6939742-6941741 Eucalyptus grandis
Eucgr.J00628 5.0kb upstream 5.0kb upstream 6770 true Chr10: 6941742-6948511 Eucalyptus grandis
Eucgr.J00628 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6943512-6948511 Eucalyptus grandis
Eucgr.J00628 5.0kb downstream 5.0kb downstream 6770 true Chr10: 6936742-6943511 Eucalyptus grandis
Eucgr.J00628 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6936742-6941741 Eucalyptus grandis
Eucgr.J00628 10.0kb upstream 10.0kb upstream 11770 true Chr10: 6941742-6953511 Eucalyptus grandis
Eucgr.J00628 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6943512-6953511 Eucalyptus grandis
Eucgr.J00628 10.0kb downstream 10.0kb downstream 11770 true Chr10: 6931742-6943511 Eucalyptus grandis
Eucgr.J00628 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6931742-6941741 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061418 5270 Rosid View MSA
123742078 5271 Pentapetalae View MSA
122788444 5272 Eudicot View MSA
122042676 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.74217 0.0 5.15552    
cufflinks 1.56772 0.0 4.70594    
cufflinks 10.3693 0.0 25.7676   High
cufflinks 4.70419 0.0 12.5391    
cufflinks 1.42873 0.0 4.22414    

0 Strain