Gene : Eucgr.J00600 E. grandis v2.0
Defline:  (1 of 1) PF11347 - Protein of unknown function (DUF3148) (DUF3148) Genomic Order:  524
Name:  ? Eucgr.J00600 Secondary Identifier:  ? PAC:32034473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00600 0.5kb upstream 0.5kb upstream 1567 true Chr10: 6719691-6721257 Eucalyptus grandis
Eucgr.J00600 0.5kb upstream 0.5kb upstream 500 false Chr10: 6719691-6720190 Eucalyptus grandis
Eucgr.J00600 0.5kb downstream 0.5kb downstream 1567 true Chr10: 6720191-6721757 Eucalyptus grandis
Eucgr.J00600 0.5kb downstream 0.5kb downstream 500 false Chr10: 6721258-6721757 Eucalyptus grandis
Eucgr.J00600 1.0kb upstream 1.0kb upstream 2067 true Chr10: 6719191-6721257 Eucalyptus grandis
Eucgr.J00600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6719191-6720190 Eucalyptus grandis
Eucgr.J00600 1.0kb downstream 1.0kb downstream 2067 true Chr10: 6720191-6722257 Eucalyptus grandis
Eucgr.J00600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6721258-6722257 Eucalyptus grandis
Eucgr.J00600 2.0kb upstream 2.0kb upstream 3067 true Chr10: 6718191-6721257 Eucalyptus grandis
Eucgr.J00600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6718191-6720190 Eucalyptus grandis
Eucgr.J00600 2.0kb downstream 2.0kb downstream 3067 true Chr10: 6720191-6723257 Eucalyptus grandis
Eucgr.J00600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6721258-6723257 Eucalyptus grandis
Eucgr.J00600 5.0kb upstream 5.0kb upstream 6067 true Chr10: 6715191-6721257 Eucalyptus grandis
Eucgr.J00600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6715191-6720190 Eucalyptus grandis
Eucgr.J00600 5.0kb downstream 5.0kb downstream 6067 true Chr10: 6720191-6726257 Eucalyptus grandis
Eucgr.J00600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6721258-6726257 Eucalyptus grandis
Eucgr.J00600 10.0kb upstream 10.0kb upstream 11067 true Chr10: 6710191-6721257 Eucalyptus grandis
Eucgr.J00600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6710191-6720190 Eucalyptus grandis
Eucgr.J00600 10.0kb downstream 10.0kb downstream 11067 true Chr10: 6720191-6731257 Eucalyptus grandis
Eucgr.J00600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6721258-6731257 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063513 5270 Rosid View MSA
123741843 5271 Pentapetalae View MSA
122795737 5272 Eudicot View MSA
122044636 5273 Angiosperm View MSA
121348938 5274 Embryophyte View MSA
123381087 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.36746 0.0 10.6998    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.935672 0.0 3.51509    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 17.2234 0.0 41.6386   High

0 Strain