Gene : Eucgr.J00578 E. grandis v2.0
Defline:  (1 of 2) PTHR11668//PTHR11668:SF243 - SERINE/THREONINE PROTEIN PHOSPHATASE Genomic Order:  504
Name:  ? Eucgr.J00578 Secondary Identifier:  ? PAC:32033857
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00578 0.5kb upstream 0.5kb upstream 12240 true Chr10: 6505088-6517327 Eucalyptus grandis
Eucgr.J00578 0.5kb upstream 0.5kb upstream 500 false Chr10: 6516828-6517327 Eucalyptus grandis
Eucgr.J00578 0.5kb downstream 0.5kb downstream 12240 true Chr10: 6504588-6516827 Eucalyptus grandis
Eucgr.J00578 0.5kb downstream 0.5kb downstream 500 false Chr10: 6504588-6505087 Eucalyptus grandis
Eucgr.J00578 1.0kb upstream 1.0kb upstream 12740 true Chr10: 6505088-6517827 Eucalyptus grandis
Eucgr.J00578 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6516828-6517827 Eucalyptus grandis
Eucgr.J00578 1.0kb downstream 1.0kb downstream 12740 true Chr10: 6504088-6516827 Eucalyptus grandis
Eucgr.J00578 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6504088-6505087 Eucalyptus grandis
Eucgr.J00578 2.0kb upstream 2.0kb upstream 13740 true Chr10: 6505088-6518827 Eucalyptus grandis
Eucgr.J00578 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6516828-6518827 Eucalyptus grandis
Eucgr.J00578 2.0kb downstream 2.0kb downstream 13740 true Chr10: 6503088-6516827 Eucalyptus grandis
Eucgr.J00578 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6503088-6505087 Eucalyptus grandis
Eucgr.J00578 5.0kb upstream 5.0kb upstream 16740 true Chr10: 6505088-6521827 Eucalyptus grandis
Eucgr.J00578 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6516828-6521827 Eucalyptus grandis
Eucgr.J00578 5.0kb downstream 5.0kb downstream 16740 true Chr10: 6500088-6516827 Eucalyptus grandis
Eucgr.J00578 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6500088-6505087 Eucalyptus grandis
Eucgr.J00578 10.0kb upstream 10.0kb upstream 21740 true Chr10: 6505088-6526827 Eucalyptus grandis
Eucgr.J00578 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6516828-6526827 Eucalyptus grandis
Eucgr.J00578 10.0kb downstream 10.0kb downstream 21740 true Chr10: 6495088-6516827 Eucalyptus grandis
Eucgr.J00578 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6495088-6505087 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052567 5270 Rosid View MSA
123741777 5271 Pentapetalae View MSA
122797136 5272 Eudicot View MSA
122049960 5273 Angiosperm View MSA
121349504 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1486 0.0 38.0324    
cufflinks 13.4826 0.0 29.8204    
cufflinks 17.1815 0.0 38.1029    
cufflinks 21.2327 0.0 47.3919   High
cufflinks 17.1874 0.0 38.1276    
cufflinks 12.1332 0.0 26.8328   Low

0 Strain