Gene : Eucgr.J00581 E. grandis v2.0
Defline:  (1 of 2) PTHR32295:SF12 - PROTEIN IQ-DOMAIN 15-RELATED Genomic Order:  507
Name:  ? Eucgr.J00581 Secondary Identifier:  ? PAC:32034328
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00581 0.5kb upstream 0.5kb upstream 6619 true Chr10: 6532383-6539001 Eucalyptus grandis
Eucgr.J00581 0.5kb upstream 0.5kb upstream 500 false Chr10: 6538502-6539001 Eucalyptus grandis
Eucgr.J00581 0.5kb downstream 0.5kb downstream 6619 true Chr10: 6531883-6538501 Eucalyptus grandis
Eucgr.J00581 0.5kb downstream 0.5kb downstream 500 false Chr10: 6531883-6532382 Eucalyptus grandis
Eucgr.J00581 1.0kb upstream 1.0kb upstream 7119 true Chr10: 6532383-6539501 Eucalyptus grandis
Eucgr.J00581 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6538502-6539501 Eucalyptus grandis
Eucgr.J00581 1.0kb downstream 1.0kb downstream 7119 true Chr10: 6531383-6538501 Eucalyptus grandis
Eucgr.J00581 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6531383-6532382 Eucalyptus grandis
Eucgr.J00581 2.0kb upstream 2.0kb upstream 8119 true Chr10: 6532383-6540501 Eucalyptus grandis
Eucgr.J00581 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6538502-6540501 Eucalyptus grandis
Eucgr.J00581 2.0kb downstream 2.0kb downstream 8119 true Chr10: 6530383-6538501 Eucalyptus grandis
Eucgr.J00581 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6530383-6532382 Eucalyptus grandis
Eucgr.J00581 5.0kb upstream 5.0kb upstream 11119 true Chr10: 6532383-6543501 Eucalyptus grandis
Eucgr.J00581 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6538502-6543501 Eucalyptus grandis
Eucgr.J00581 5.0kb downstream 5.0kb downstream 11119 true Chr10: 6527383-6538501 Eucalyptus grandis
Eucgr.J00581 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6527383-6532382 Eucalyptus grandis
Eucgr.J00581 10.0kb upstream 10.0kb upstream 16119 true Chr10: 6532383-6548501 Eucalyptus grandis
Eucgr.J00581 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6538502-6548501 Eucalyptus grandis
Eucgr.J00581 10.0kb downstream 10.0kb downstream 16119 true Chr10: 6522383-6538501 Eucalyptus grandis
Eucgr.J00581 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6522383-6532382 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066612 5270 Rosid View MSA
123736615 5271 Pentapetalae View MSA
122788189 5272 Eudicot View MSA
122046736 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.3868 0.0 71.7035 High  
cufflinks 23.0711 0.0 51.4474    
cufflinks 30.9333 0.0 68.5288 High  
cufflinks 30.4889 0.0 67.5499    
cufflinks 24.6557 0.0 54.865    
cufflinks 7.12775 0.0 17.392   Low

0 Strain