Gene : Eucgr.J00529 E. grandis v2.0
Defline:  (1 of 5) PTHR23088//PTHR23088:SF31 - NITRILASE-RELATED Genomic Order:  465
Name:  ? Eucgr.J00529 Secondary Identifier:  ? PAC:32035754
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ASPARAGINE-DEG1-PWY Eucalyptus grandis pathologic  
Egrandis ASPSYNII-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00529 0.5kb upstream 0.5kb upstream 3395 true Chr10: 5889615-5893009 Eucalyptus grandis
Eucgr.J00529 0.5kb upstream 0.5kb upstream 500 false Chr10: 5892510-5893009 Eucalyptus grandis
Eucgr.J00529 0.5kb downstream 0.5kb downstream 3395 true Chr10: 5889115-5892509 Eucalyptus grandis
Eucgr.J00529 0.5kb downstream 0.5kb downstream 500 false Chr10: 5889115-5889614 Eucalyptus grandis
Eucgr.J00529 1.0kb upstream 1.0kb upstream 3895 true Chr10: 5889615-5893509 Eucalyptus grandis
Eucgr.J00529 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5892510-5893509 Eucalyptus grandis
Eucgr.J00529 1.0kb downstream 1.0kb downstream 3895 true Chr10: 5888615-5892509 Eucalyptus grandis
Eucgr.J00529 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5888615-5889614 Eucalyptus grandis
Eucgr.J00529 2.0kb upstream 2.0kb upstream 4895 true Chr10: 5889615-5894509 Eucalyptus grandis
Eucgr.J00529 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5892510-5894509 Eucalyptus grandis
Eucgr.J00529 2.0kb downstream 2.0kb downstream 4895 true Chr10: 5887615-5892509 Eucalyptus grandis
Eucgr.J00529 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5887615-5889614 Eucalyptus grandis
Eucgr.J00529 5.0kb upstream 5.0kb upstream 7895 true Chr10: 5889615-5897509 Eucalyptus grandis
Eucgr.J00529 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5892510-5897509 Eucalyptus grandis
Eucgr.J00529 5.0kb downstream 5.0kb downstream 7895 true Chr10: 5884615-5892509 Eucalyptus grandis
Eucgr.J00529 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5884615-5889614 Eucalyptus grandis
Eucgr.J00529 10.0kb upstream 10.0kb upstream 12895 true Chr10: 5889615-5902509 Eucalyptus grandis
Eucgr.J00529 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5892510-5902509 Eucalyptus grandis
Eucgr.J00529 10.0kb downstream 10.0kb downstream 12895 true Chr10: 5879615-5892509 Eucalyptus grandis
Eucgr.J00529 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5879615-5889614 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063597 5270 Rosid View MSA
123751549 5271 Pentapetalae View MSA
122796633 5272 Eudicot View MSA
122043736 5273 Angiosperm View MSA
121347314 5274 Embryophyte View MSA
123380526 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.2266 0.0 103.514 High High
cufflinks 21.8289 0.0 49.1807    
cufflinks 41.6393 0.0 94.4024 High High
cufflinks 18.1923 0.0 41.5961   Low
cufflinks 28.9957 0.0 75.6236    
cufflinks 28.519 0.0 64.2541    

0 Strain