Gene : Eucgr.J00541 E. grandis v2.0
Defline:  (1 of 1) PTHR30060 - INNER MEMBRANE PROTEIN Genomic Order:  477
Name:  ? Eucgr.J00541 Secondary Identifier:  ? PAC:32034840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00541 0.5kb upstream 0.5kb upstream 4422 true Chr10: 5940393-5944814 Eucalyptus grandis
Eucgr.J00541 0.5kb upstream 0.5kb upstream 500 false Chr10: 5940393-5940892 Eucalyptus grandis
Eucgr.J00541 0.5kb downstream 0.5kb downstream 4422 true Chr10: 5940893-5945314 Eucalyptus grandis
Eucgr.J00541 0.5kb downstream 0.5kb downstream 500 false Chr10: 5944815-5945314 Eucalyptus grandis
Eucgr.J00541 1.0kb upstream 1.0kb upstream 4922 true Chr10: 5939893-5944814 Eucalyptus grandis
Eucgr.J00541 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5939893-5940892 Eucalyptus grandis
Eucgr.J00541 1.0kb downstream 1.0kb downstream 4922 true Chr10: 5940893-5945814 Eucalyptus grandis
Eucgr.J00541 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5944815-5945814 Eucalyptus grandis
Eucgr.J00541 2.0kb upstream 2.0kb upstream 5922 true Chr10: 5938893-5944814 Eucalyptus grandis
Eucgr.J00541 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5938893-5940892 Eucalyptus grandis
Eucgr.J00541 2.0kb downstream 2.0kb downstream 5922 true Chr10: 5940893-5946814 Eucalyptus grandis
Eucgr.J00541 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5944815-5946814 Eucalyptus grandis
Eucgr.J00541 5.0kb upstream 5.0kb upstream 8922 true Chr10: 5935893-5944814 Eucalyptus grandis
Eucgr.J00541 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5935893-5940892 Eucalyptus grandis
Eucgr.J00541 5.0kb downstream 5.0kb downstream 8922 true Chr10: 5940893-5949814 Eucalyptus grandis
Eucgr.J00541 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5944815-5949814 Eucalyptus grandis
Eucgr.J00541 10.0kb upstream 10.0kb upstream 13922 true Chr10: 5930893-5944814 Eucalyptus grandis
Eucgr.J00541 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5930893-5940892 Eucalyptus grandis
Eucgr.J00541 10.0kb downstream 10.0kb downstream 13922 true Chr10: 5940893-5954814 Eucalyptus grandis
Eucgr.J00541 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5944815-5954814 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067754 5270 Rosid View MSA
123748299 5271 Pentapetalae View MSA
122787989 5272 Eudicot View MSA
122042336 5273 Angiosperm View MSA
121346143 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7003 0.0 35.2623    
cufflinks 12.8974 0.0 29.2999    
cufflinks 13.2435 0.0 30.0145    
cufflinks 8.59011 0.0 20.1127   Low
cufflinks 10.9448 0.0 25.1589    
cufflinks 18.2868 0.0 40.8283   High

0 Strain