Gene : Eucgr.J00500 E. grandis v2.0
Defline:  (1 of 1) PTHR23088:SF26 - N-CARBAMOYLPUTRESCINE AMIDASE Genomic Order:  438
Name:  ? Eucgr.J00500 Secondary Identifier:  ? PAC:32032339
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-43 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00500 0.5kb upstream 0.5kb upstream 4315 true Chr10: 5352531-5356845 Eucalyptus grandis
Eucgr.J00500 0.5kb upstream 0.5kb upstream 500 false Chr10: 5352531-5353030 Eucalyptus grandis
Eucgr.J00500 0.5kb downstream 0.5kb downstream 4315 true Chr10: 5353031-5357345 Eucalyptus grandis
Eucgr.J00500 0.5kb downstream 0.5kb downstream 500 false Chr10: 5356846-5357345 Eucalyptus grandis
Eucgr.J00500 1.0kb upstream 1.0kb upstream 4815 true Chr10: 5352031-5356845 Eucalyptus grandis
Eucgr.J00500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5352031-5353030 Eucalyptus grandis
Eucgr.J00500 1.0kb downstream 1.0kb downstream 4815 true Chr10: 5353031-5357845 Eucalyptus grandis
Eucgr.J00500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5356846-5357845 Eucalyptus grandis
Eucgr.J00500 2.0kb upstream 2.0kb upstream 5815 true Chr10: 5351031-5356845 Eucalyptus grandis
Eucgr.J00500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5351031-5353030 Eucalyptus grandis
Eucgr.J00500 2.0kb downstream 2.0kb downstream 5815 true Chr10: 5353031-5358845 Eucalyptus grandis
Eucgr.J00500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5356846-5358845 Eucalyptus grandis
Eucgr.J00500 5.0kb upstream 5.0kb upstream 8815 true Chr10: 5348031-5356845 Eucalyptus grandis
Eucgr.J00500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5348031-5353030 Eucalyptus grandis
Eucgr.J00500 5.0kb downstream 5.0kb downstream 8815 true Chr10: 5353031-5361845 Eucalyptus grandis
Eucgr.J00500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5356846-5361845 Eucalyptus grandis
Eucgr.J00500 10.0kb upstream 10.0kb upstream 13815 true Chr10: 5343031-5356845 Eucalyptus grandis
Eucgr.J00500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5343031-5353030 Eucalyptus grandis
Eucgr.J00500 10.0kb downstream 10.0kb downstream 13815 true Chr10: 5353031-5366845 Eucalyptus grandis
Eucgr.J00500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5356846-5366845 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0653 0.0 22.8632    
cufflinks 9.86789 0.0 22.3742    
cufflinks 8.95843 0.0 20.4524    
cufflinks 5.65218 0.0 13.3237   Low
cufflinks 9.91702 0.0 22.4765    
cufflinks 5.69443 0.0 13.5582   Low

0 Strain