Gene : Eucgr.J00458 E. grandis v2.0
Defline:  (1 of 1) PTHR11717:SF7 - LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE Genomic Order:  399
Name:  ? Eucgr.J00458 Secondary Identifier:  ? PAC:32034124
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00458 0.5kb upstream 0.5kb upstream 4283 true Chr10: 4948063-4952345 Eucalyptus grandis
Eucgr.J00458 0.5kb upstream 0.5kb upstream 500 false Chr10: 4951846-4952345 Eucalyptus grandis
Eucgr.J00458 0.5kb downstream 0.5kb downstream 4283 true Chr10: 4947563-4951845 Eucalyptus grandis
Eucgr.J00458 0.5kb downstream 0.5kb downstream 500 false Chr10: 4947563-4948062 Eucalyptus grandis
Eucgr.J00458 1.0kb upstream 1.0kb upstream 4783 true Chr10: 4948063-4952845 Eucalyptus grandis
Eucgr.J00458 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4951846-4952845 Eucalyptus grandis
Eucgr.J00458 1.0kb downstream 1.0kb downstream 4783 true Chr10: 4947063-4951845 Eucalyptus grandis
Eucgr.J00458 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4947063-4948062 Eucalyptus grandis
Eucgr.J00458 2.0kb upstream 2.0kb upstream 5783 true Chr10: 4948063-4953845 Eucalyptus grandis
Eucgr.J00458 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4951846-4953845 Eucalyptus grandis
Eucgr.J00458 2.0kb downstream 2.0kb downstream 5783 true Chr10: 4946063-4951845 Eucalyptus grandis
Eucgr.J00458 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4946063-4948062 Eucalyptus grandis
Eucgr.J00458 5.0kb upstream 5.0kb upstream 8783 true Chr10: 4948063-4956845 Eucalyptus grandis
Eucgr.J00458 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4951846-4956845 Eucalyptus grandis
Eucgr.J00458 5.0kb downstream 5.0kb downstream 8783 true Chr10: 4943063-4951845 Eucalyptus grandis
Eucgr.J00458 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4943063-4948062 Eucalyptus grandis
Eucgr.J00458 10.0kb upstream 10.0kb upstream 13783 true Chr10: 4948063-4961845 Eucalyptus grandis
Eucgr.J00458 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4951846-4961845 Eucalyptus grandis
Eucgr.J00458 10.0kb downstream 10.0kb downstream 13783 true Chr10: 4938063-4951845 Eucalyptus grandis
Eucgr.J00458 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4938063-4948062 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070782 5270 Rosid View MSA
123742468 5271 Pentapetalae View MSA
122794399 5272 Eudicot View MSA
122048727 5273 Angiosperm View MSA
121348466 5274 Embryophyte View MSA
123425721 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.29419 0.0 20.5484    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.74774 0.0 17.1357    
cufflinks 3.92028 0.0 10.4951   Low
cufflinks 5.63056 0.0 14.5525    
cufflinks 11.9803 0.0 28.5247   High

0 Strain