Gene : Eucgr.J00446 E. grandis v2.0
Defline:  (1 of 1) 2.5.1.27//2.5.1.75 - Adenylate dimethylallyltransferase (AMP-dependent) / Isopentenyltransferase // tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  390
Name:  ? Eucgr.J00446 Secondary Identifier:  ? PAC:32032173
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2681 Eucalyptus grandis pathologic  
Egrandis PWY-2781 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00446 0.5kb upstream 0.5kb upstream 5043 true Chr10: 4785010-4790052 Eucalyptus grandis
Eucgr.J00446 0.5kb upstream 0.5kb upstream 500 false Chr10: 4789553-4790052 Eucalyptus grandis
Eucgr.J00446 0.5kb downstream 0.5kb downstream 5043 true Chr10: 4784510-4789552 Eucalyptus grandis
Eucgr.J00446 0.5kb downstream 0.5kb downstream 500 false Chr10: 4784510-4785009 Eucalyptus grandis
Eucgr.J00446 1.0kb upstream 1.0kb upstream 5543 true Chr10: 4785010-4790552 Eucalyptus grandis
Eucgr.J00446 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4789553-4790552 Eucalyptus grandis
Eucgr.J00446 1.0kb downstream 1.0kb downstream 5543 true Chr10: 4784010-4789552 Eucalyptus grandis
Eucgr.J00446 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4784010-4785009 Eucalyptus grandis
Eucgr.J00446 2.0kb upstream 2.0kb upstream 6543 true Chr10: 4785010-4791552 Eucalyptus grandis
Eucgr.J00446 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4789553-4791552 Eucalyptus grandis
Eucgr.J00446 2.0kb downstream 2.0kb downstream 6543 true Chr10: 4783010-4789552 Eucalyptus grandis
Eucgr.J00446 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4783010-4785009 Eucalyptus grandis
Eucgr.J00446 5.0kb upstream 5.0kb upstream 9543 true Chr10: 4785010-4794552 Eucalyptus grandis
Eucgr.J00446 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4789553-4794552 Eucalyptus grandis
Eucgr.J00446 5.0kb downstream 5.0kb downstream 9543 true Chr10: 4780010-4789552 Eucalyptus grandis
Eucgr.J00446 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4780010-4785009 Eucalyptus grandis
Eucgr.J00446 10.0kb upstream 10.0kb upstream 14543 true Chr10: 4785010-4799552 Eucalyptus grandis
Eucgr.J00446 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4789553-4799552 Eucalyptus grandis
Eucgr.J00446 10.0kb downstream 10.0kb downstream 14543 true Chr10: 4775010-4789552 Eucalyptus grandis
Eucgr.J00446 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4775010-4785009 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061128 5270 Rosid View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.58904 0.0 1.82882    
cufflinks 0.854015 0.0 2.52725 Low  
cufflinks 0.516632 0.0 1.62599    
cufflinks 0.427062 0.0 1.37368 Low  
cufflinks 0.601964 0.0 1.86191 Low  
cufflinks 3.20735 0.0 8.33955   High

0 Strain