Gene : Eucgr.J00417 E. grandis v2.0
Defline:  (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED Genomic Order:  367
Name:  ? Eucgr.J00417 Secondary Identifier:  ? PAC:32033868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00417 0.5kb upstream 0.5kb upstream 9795 true Chr10: 4139486-4149280 Eucalyptus grandis
Eucgr.J00417 0.5kb upstream 0.5kb upstream 500 false Chr10: 4139486-4139985 Eucalyptus grandis
Eucgr.J00417 0.5kb downstream 0.5kb downstream 9795 true Chr10: 4139986-4149780 Eucalyptus grandis
Eucgr.J00417 0.5kb downstream 0.5kb downstream 500 false Chr10: 4149281-4149780 Eucalyptus grandis
Eucgr.J00417 1.0kb upstream 1.0kb upstream 10295 true Chr10: 4138986-4149280 Eucalyptus grandis
Eucgr.J00417 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4138986-4139985 Eucalyptus grandis
Eucgr.J00417 1.0kb downstream 1.0kb downstream 10295 true Chr10: 4139986-4150280 Eucalyptus grandis
Eucgr.J00417 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4149281-4150280 Eucalyptus grandis
Eucgr.J00417 2.0kb upstream 2.0kb upstream 11295 true Chr10: 4137986-4149280 Eucalyptus grandis
Eucgr.J00417 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4137986-4139985 Eucalyptus grandis
Eucgr.J00417 2.0kb downstream 2.0kb downstream 11295 true Chr10: 4139986-4151280 Eucalyptus grandis
Eucgr.J00417 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4149281-4151280 Eucalyptus grandis
Eucgr.J00417 5.0kb upstream 5.0kb upstream 14295 true Chr10: 4134986-4149280 Eucalyptus grandis
Eucgr.J00417 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4134986-4139985 Eucalyptus grandis
Eucgr.J00417 5.0kb downstream 5.0kb downstream 14295 true Chr10: 4139986-4154280 Eucalyptus grandis
Eucgr.J00417 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4149281-4154280 Eucalyptus grandis
Eucgr.J00417 10.0kb upstream 10.0kb upstream 19295 true Chr10: 4129986-4149280 Eucalyptus grandis
Eucgr.J00417 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4129986-4139985 Eucalyptus grandis
Eucgr.J00417 10.0kb downstream 10.0kb downstream 19295 true Chr10: 4139986-4159280 Eucalyptus grandis
Eucgr.J00417 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4149281-4159280 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063428 5270 Rosid View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.08005 0.0 11.5547    
cufflinks 2.64243 0.0 6.33234    
cufflinks 6.68799 0.0 14.9797   High
cufflinks 1.96613 0.0 4.83379   Low
cufflinks 2.63457 0.0 6.3224    
cufflinks 6.03252 0.0 13.6031    

0 Strain