Gene : Eucgr.J00418 E. grandis v2.0
Defline:  (1 of 1) PTHR28052:SF1 - UPF0545 PROTEIN C22ORF39 Genomic Order:  368
Name:  ? Eucgr.J00418 Secondary Identifier:  ? PAC:32034587
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00418 0.5kb upstream 0.5kb upstream 3264 true Chr10: 4149741-4153004 Eucalyptus grandis
Eucgr.J00418 0.5kb upstream 0.5kb upstream 500 false Chr10: 4149741-4150240 Eucalyptus grandis
Eucgr.J00418 0.5kb downstream 0.5kb downstream 3264 true Chr10: 4150241-4153504 Eucalyptus grandis
Eucgr.J00418 0.5kb downstream 0.5kb downstream 500 false Chr10: 4153005-4153504 Eucalyptus grandis
Eucgr.J00418 1.0kb upstream 1.0kb upstream 3764 true Chr10: 4149241-4153004 Eucalyptus grandis
Eucgr.J00418 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4149241-4150240 Eucalyptus grandis
Eucgr.J00418 1.0kb downstream 1.0kb downstream 3764 true Chr10: 4150241-4154004 Eucalyptus grandis
Eucgr.J00418 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4153005-4154004 Eucalyptus grandis
Eucgr.J00418 2.0kb upstream 2.0kb upstream 4764 true Chr10: 4148241-4153004 Eucalyptus grandis
Eucgr.J00418 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4148241-4150240 Eucalyptus grandis
Eucgr.J00418 2.0kb downstream 2.0kb downstream 4764 true Chr10: 4150241-4155004 Eucalyptus grandis
Eucgr.J00418 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4153005-4155004 Eucalyptus grandis
Eucgr.J00418 5.0kb upstream 5.0kb upstream 7764 true Chr10: 4145241-4153004 Eucalyptus grandis
Eucgr.J00418 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4145241-4150240 Eucalyptus grandis
Eucgr.J00418 5.0kb downstream 5.0kb downstream 7764 true Chr10: 4150241-4158004 Eucalyptus grandis
Eucgr.J00418 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4153005-4158004 Eucalyptus grandis
Eucgr.J00418 10.0kb upstream 10.0kb upstream 12764 true Chr10: 4140241-4153004 Eucalyptus grandis
Eucgr.J00418 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4140241-4150240 Eucalyptus grandis
Eucgr.J00418 10.0kb downstream 10.0kb downstream 12764 true Chr10: 4150241-4163004 Eucalyptus grandis
Eucgr.J00418 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4153005-4163004 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067499 5270 Rosid View MSA
123746136 5271 Pentapetalae View MSA
122790093 5272 Eudicot View MSA
122047882 5273 Angiosperm View MSA
121343967 5274 Embryophyte View MSA
123425812 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.99329 0.0 20.5775    
cufflinks 6.35496 0.0 16.7922   Low
cufflinks 12.3708 0.0 30.576    
cufflinks 19.3506 0.0 45.8897    
cufflinks 24.3438 0.0 56.5718   High
cufflinks 10.0443 0.0 25.2087    

0 Strain