Gene : Eucgr.J00414 E. grandis v2.0
Defline:  (1 of 28) PF03000 - NPH3 family (NPH3) Genomic Order:  364
Name:  ? Eucgr.J00414 Secondary Identifier:  ? PAC:32034037
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00414 0.5kb upstream 0.5kb upstream 4394 true Chr10: 4100658-4105051 Eucalyptus grandis
Eucgr.J00414 0.5kb upstream 0.5kb upstream 500 false Chr10: 4100658-4101157 Eucalyptus grandis
Eucgr.J00414 0.5kb downstream 0.5kb downstream 4394 true Chr10: 4101158-4105551 Eucalyptus grandis
Eucgr.J00414 0.5kb downstream 0.5kb downstream 500 false Chr10: 4105052-4105551 Eucalyptus grandis
Eucgr.J00414 1.0kb upstream 1.0kb upstream 4894 true Chr10: 4100158-4105051 Eucalyptus grandis
Eucgr.J00414 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4100158-4101157 Eucalyptus grandis
Eucgr.J00414 1.0kb downstream 1.0kb downstream 4894 true Chr10: 4101158-4106051 Eucalyptus grandis
Eucgr.J00414 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4105052-4106051 Eucalyptus grandis
Eucgr.J00414 2.0kb upstream 2.0kb upstream 5894 true Chr10: 4099158-4105051 Eucalyptus grandis
Eucgr.J00414 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4099158-4101157 Eucalyptus grandis
Eucgr.J00414 2.0kb downstream 2.0kb downstream 5894 true Chr10: 4101158-4107051 Eucalyptus grandis
Eucgr.J00414 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4105052-4107051 Eucalyptus grandis
Eucgr.J00414 5.0kb upstream 5.0kb upstream 8894 true Chr10: 4096158-4105051 Eucalyptus grandis
Eucgr.J00414 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4096158-4101157 Eucalyptus grandis
Eucgr.J00414 5.0kb downstream 5.0kb downstream 8894 true Chr10: 4101158-4110051 Eucalyptus grandis
Eucgr.J00414 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4105052-4110051 Eucalyptus grandis
Eucgr.J00414 10.0kb upstream 10.0kb upstream 13894 true Chr10: 4091158-4105051 Eucalyptus grandis
Eucgr.J00414 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4091158-4101157 Eucalyptus grandis
Eucgr.J00414 10.0kb downstream 10.0kb downstream 13894 true Chr10: 4101158-4115051 Eucalyptus grandis
Eucgr.J00414 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4105052-4115051 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061696 5270 Rosid View MSA
123736594 5271 Pentapetalae View MSA
122785807 5272 Eudicot View MSA
122045563 5273 Angiosperm View MSA
121310465 5274 Embryophyte View MSA
123347939 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.29113 0.0 5.72835   Low
cufflinks 4.3638 0.0 10.2036    
cufflinks 2.77872 0.0 6.78786    
cufflinks 4.25852 0.0 9.95827    
cufflinks 4.38064 0.0 10.2613    
cufflinks 2.26474 0.0 5.68391   Low

0 Strain