Gene : Eucgr.J00387 E. grandis v2.0
Defline:  (1 of 6) PF06136 - Domain of unknown function (DUF966) (DUF966) Genomic Order:  340
Name:  ? Eucgr.J00387 Secondary Identifier:  ? PAC:32034119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00387 0.5kb upstream 0.5kb upstream 4874 true Chr10: 3799428-3804301 Eucalyptus grandis
Eucgr.J00387 0.5kb upstream 0.5kb upstream 500 false Chr10: 3799428-3799927 Eucalyptus grandis
Eucgr.J00387 0.5kb downstream 0.5kb downstream 4874 true Chr10: 3799928-3804801 Eucalyptus grandis
Eucgr.J00387 0.5kb downstream 0.5kb downstream 500 false Chr10: 3804302-3804801 Eucalyptus grandis
Eucgr.J00387 1.0kb upstream 1.0kb upstream 5374 true Chr10: 3798928-3804301 Eucalyptus grandis
Eucgr.J00387 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3798928-3799927 Eucalyptus grandis
Eucgr.J00387 1.0kb downstream 1.0kb downstream 5374 true Chr10: 3799928-3805301 Eucalyptus grandis
Eucgr.J00387 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3804302-3805301 Eucalyptus grandis
Eucgr.J00387 2.0kb upstream 2.0kb upstream 6374 true Chr10: 3797928-3804301 Eucalyptus grandis
Eucgr.J00387 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3797928-3799927 Eucalyptus grandis
Eucgr.J00387 2.0kb downstream 2.0kb downstream 6374 true Chr10: 3799928-3806301 Eucalyptus grandis
Eucgr.J00387 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3804302-3806301 Eucalyptus grandis
Eucgr.J00387 5.0kb upstream 5.0kb upstream 9374 true Chr10: 3794928-3804301 Eucalyptus grandis
Eucgr.J00387 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3794928-3799927 Eucalyptus grandis
Eucgr.J00387 5.0kb downstream 5.0kb downstream 9374 true Chr10: 3799928-3809301 Eucalyptus grandis
Eucgr.J00387 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3804302-3809301 Eucalyptus grandis
Eucgr.J00387 10.0kb upstream 10.0kb upstream 14374 true Chr10: 3789928-3804301 Eucalyptus grandis
Eucgr.J00387 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3789928-3799927 Eucalyptus grandis
Eucgr.J00387 10.0kb downstream 10.0kb downstream 14374 true Chr10: 3799928-3814301 Eucalyptus grandis
Eucgr.J00387 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3804302-3814301 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064121 5270 Rosid View MSA
123739995 5271 Pentapetalae View MSA
122790698 5272 Eudicot View MSA
122050993 5273 Angiosperm View MSA
121349769 5274 Embryophyte View MSA
123381438 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5979 0.0 39.628    
cufflinks 2.29276 0.0 5.85708   Low
cufflinks 13.0923 0.0 35.8087    
cufflinks 7.04463 0.0 16.4233    
cufflinks 10.6752 0.0 30.1975    
cufflinks 9.84327 0.0 27.3498    

0 Strain