Gene : Eucgr.J00392 E. grandis v2.0
Defline:  (1 of 2) KOG3484 - Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and related proteins Genomic Order:  345
Name:  ? Eucgr.J00392 Secondary Identifier:  ? PAC:32035506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00392 0.5kb upstream 0.5kb upstream 1880 true Chr10: 3826396-3828275 Eucalyptus grandis
Eucgr.J00392 0.5kb upstream 0.5kb upstream 500 false Chr10: 3827776-3828275 Eucalyptus grandis
Eucgr.J00392 0.5kb downstream 0.5kb downstream 1880 true Chr10: 3825896-3827775 Eucalyptus grandis
Eucgr.J00392 0.5kb downstream 0.5kb downstream 500 false Chr10: 3825896-3826395 Eucalyptus grandis
Eucgr.J00392 1.0kb upstream 1.0kb upstream 2380 true Chr10: 3826396-3828775 Eucalyptus grandis
Eucgr.J00392 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3827776-3828775 Eucalyptus grandis
Eucgr.J00392 1.0kb downstream 1.0kb downstream 2380 true Chr10: 3825396-3827775 Eucalyptus grandis
Eucgr.J00392 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3825396-3826395 Eucalyptus grandis
Eucgr.J00392 2.0kb upstream 2.0kb upstream 3380 true Chr10: 3826396-3829775 Eucalyptus grandis
Eucgr.J00392 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3827776-3829775 Eucalyptus grandis
Eucgr.J00392 2.0kb downstream 2.0kb downstream 3380 true Chr10: 3824396-3827775 Eucalyptus grandis
Eucgr.J00392 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3824396-3826395 Eucalyptus grandis
Eucgr.J00392 5.0kb upstream 5.0kb upstream 6380 true Chr10: 3826396-3832775 Eucalyptus grandis
Eucgr.J00392 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3827776-3832775 Eucalyptus grandis
Eucgr.J00392 5.0kb downstream 5.0kb downstream 6380 true Chr10: 3821396-3827775 Eucalyptus grandis
Eucgr.J00392 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3821396-3826395 Eucalyptus grandis
Eucgr.J00392 10.0kb upstream 10.0kb upstream 11380 true Chr10: 3826396-3837775 Eucalyptus grandis
Eucgr.J00392 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3827776-3837775 Eucalyptus grandis
Eucgr.J00392 10.0kb downstream 10.0kb downstream 11380 true Chr10: 3816396-3827775 Eucalyptus grandis
Eucgr.J00392 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3816396-3826395 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061080 5270 Rosid View MSA
123739192 5271 Pentapetalae View MSA
122791805 5272 Eudicot View MSA
122049124 5273 Angiosperm View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 93.865 0.0 215.318 High  
cufflinks 35.0655 0.0 88.0779   Low
cufflinks 71.0033 0.0 167.918 High  
cufflinks 47.859 0.0 117.965 High  
cufflinks 126.93 0.0 286.668 High High
cufflinks 37.4127 0.0 93.8964 High  

0 Strain