Gene : Eucgr.J00358 E. grandis v2.0
Defline:  (1 of 17) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  314
Name:  ? Eucgr.J00358 Secondary Identifier:  ? PAC:32035681
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00358 0.5kb upstream 0.5kb upstream 3417 true Chr10: 3475875-3479291 Eucalyptus grandis
Eucgr.J00358 0.5kb upstream 0.5kb upstream 500 false Chr10: 3475875-3476374 Eucalyptus grandis
Eucgr.J00358 0.5kb downstream 0.5kb downstream 3417 true Chr10: 3476375-3479791 Eucalyptus grandis
Eucgr.J00358 0.5kb downstream 0.5kb downstream 500 false Chr10: 3479292-3479791 Eucalyptus grandis
Eucgr.J00358 1.0kb upstream 1.0kb upstream 3917 true Chr10: 3475375-3479291 Eucalyptus grandis
Eucgr.J00358 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3475375-3476374 Eucalyptus grandis
Eucgr.J00358 1.0kb downstream 1.0kb downstream 3917 true Chr10: 3476375-3480291 Eucalyptus grandis
Eucgr.J00358 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3479292-3480291 Eucalyptus grandis
Eucgr.J00358 2.0kb upstream 2.0kb upstream 4917 true Chr10: 3474375-3479291 Eucalyptus grandis
Eucgr.J00358 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3474375-3476374 Eucalyptus grandis
Eucgr.J00358 2.0kb downstream 2.0kb downstream 4917 true Chr10: 3476375-3481291 Eucalyptus grandis
Eucgr.J00358 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3479292-3481291 Eucalyptus grandis
Eucgr.J00358 5.0kb upstream 5.0kb upstream 7917 true Chr10: 3471375-3479291 Eucalyptus grandis
Eucgr.J00358 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3471375-3476374 Eucalyptus grandis
Eucgr.J00358 5.0kb downstream 5.0kb downstream 7917 true Chr10: 3476375-3484291 Eucalyptus grandis
Eucgr.J00358 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3479292-3484291 Eucalyptus grandis
Eucgr.J00358 10.0kb upstream 10.0kb upstream 12917 true Chr10: 3466375-3479291 Eucalyptus grandis
Eucgr.J00358 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3466375-3476374 Eucalyptus grandis
Eucgr.J00358 10.0kb downstream 10.0kb downstream 12917 true Chr10: 3476375-3489291 Eucalyptus grandis
Eucgr.J00358 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3479292-3489291 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041222 5273 Angiosperm View MSA
124061331 5270 Rosid View MSA
123737344 5271 Pentapetalae View MSA
122792572 5272 Eudicot View MSA
121350312 5274 Embryophyte View MSA
123381673 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 104.777 0.0 272.003 High  
cufflinks 78.9619 0.0 209.341 High  
cufflinks 98.7032 0.0 250.534 High  
cufflinks 76.774 0.0 193.21 High  
cufflinks 54.5273 0.0 122.746 High Low
cufflinks 152.176 0.0 398.608 High High

0 Strain