Gene : Eucgr.J01043 E. grandis v2.0
Defline:  (1 of 1) PTHR11125:SF8 - KOW DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 Genomic Order:  920
Name:  ? Eucgr.J01043 Secondary Identifier:  ? PAC:32033452
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01043 0.5kb upstream 0.5kb upstream 11504 true Chr10: 11396967-11408470 Eucalyptus grandis
Eucgr.J01043 0.5kb upstream 0.5kb upstream 500 false Chr10: 11407971-11408470 Eucalyptus grandis
Eucgr.J01043 0.5kb downstream 0.5kb downstream 11504 true Chr10: 11396467-11407970 Eucalyptus grandis
Eucgr.J01043 0.5kb downstream 0.5kb downstream 500 false Chr10: 11396467-11396966 Eucalyptus grandis
Eucgr.J01043 1.0kb upstream 1.0kb upstream 12004 true Chr10: 11396967-11408970 Eucalyptus grandis
Eucgr.J01043 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11407971-11408970 Eucalyptus grandis
Eucgr.J01043 1.0kb downstream 1.0kb downstream 12004 true Chr10: 11395967-11407970 Eucalyptus grandis
Eucgr.J01043 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11395967-11396966 Eucalyptus grandis
Eucgr.J01043 2.0kb upstream 2.0kb upstream 13004 true Chr10: 11396967-11409970 Eucalyptus grandis
Eucgr.J01043 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11407971-11409970 Eucalyptus grandis
Eucgr.J01043 2.0kb downstream 2.0kb downstream 13004 true Chr10: 11394967-11407970 Eucalyptus grandis
Eucgr.J01043 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11394967-11396966 Eucalyptus grandis
Eucgr.J01043 5.0kb upstream 5.0kb upstream 16004 true Chr10: 11396967-11412970 Eucalyptus grandis
Eucgr.J01043 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11407971-11412970 Eucalyptus grandis
Eucgr.J01043 5.0kb downstream 5.0kb downstream 16004 true Chr10: 11391967-11407970 Eucalyptus grandis
Eucgr.J01043 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11391967-11396966 Eucalyptus grandis
Eucgr.J01043 10.0kb upstream 10.0kb upstream 21004 true Chr10: 11396967-11417970 Eucalyptus grandis
Eucgr.J01043 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11407971-11417970 Eucalyptus grandis
Eucgr.J01043 10.0kb downstream 10.0kb downstream 21004 true Chr10: 11386967-11407970 Eucalyptus grandis
Eucgr.J01043 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11386967-11396966 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074331 5270 Rosid View MSA
123745938 5271 Pentapetalae View MSA
122796587 5272 Eudicot View MSA
122051188 5273 Angiosperm View MSA
121344131 5274 Embryophyte View MSA
123426539 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8832 0.0 31.2359    
cufflinks 17.0719 0.0 38.8573   High
cufflinks 12.0615 0.0 27.0368    
cufflinks 8.09267 0.0 17.9459   Low
cufflinks 11.4096 0.0 25.4849    
cufflinks 8.70704 0.0 19.2878    

0 Strain