Gene : Eucgr.J01018 E. grandis v2.0
Defline:  (1 of 1) PTHR12419//PTHR12419:SF14 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  899
Name:  ? Eucgr.J01018 Secondary Identifier:  ? PAC:32034152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01018 0.5kb upstream 0.5kb upstream 3237 true Chr10: 11053472-11056708 Eucalyptus grandis
Eucgr.J01018 0.5kb upstream 0.5kb upstream 500 false Chr10: 11053472-11053971 Eucalyptus grandis
Eucgr.J01018 0.5kb downstream 0.5kb downstream 3237 true Chr10: 11053972-11057208 Eucalyptus grandis
Eucgr.J01018 0.5kb downstream 0.5kb downstream 500 false Chr10: 11056709-11057208 Eucalyptus grandis
Eucgr.J01018 1.0kb upstream 1.0kb upstream 3737 true Chr10: 11052972-11056708 Eucalyptus grandis
Eucgr.J01018 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11052972-11053971 Eucalyptus grandis
Eucgr.J01018 1.0kb downstream 1.0kb downstream 3737 true Chr10: 11053972-11057708 Eucalyptus grandis
Eucgr.J01018 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11056709-11057708 Eucalyptus grandis
Eucgr.J01018 2.0kb upstream 2.0kb upstream 4737 true Chr10: 11051972-11056708 Eucalyptus grandis
Eucgr.J01018 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11051972-11053971 Eucalyptus grandis
Eucgr.J01018 2.0kb downstream 2.0kb downstream 4737 true Chr10: 11053972-11058708 Eucalyptus grandis
Eucgr.J01018 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11056709-11058708 Eucalyptus grandis
Eucgr.J01018 5.0kb upstream 5.0kb upstream 7737 true Chr10: 11048972-11056708 Eucalyptus grandis
Eucgr.J01018 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11048972-11053971 Eucalyptus grandis
Eucgr.J01018 5.0kb downstream 5.0kb downstream 7737 true Chr10: 11053972-11061708 Eucalyptus grandis
Eucgr.J01018 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11056709-11061708 Eucalyptus grandis
Eucgr.J01018 10.0kb upstream 10.0kb upstream 12737 true Chr10: 11043972-11056708 Eucalyptus grandis
Eucgr.J01018 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11043972-11053971 Eucalyptus grandis
Eucgr.J01018 10.0kb downstream 10.0kb downstream 12737 true Chr10: 11053972-11066708 Eucalyptus grandis
Eucgr.J01018 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11056709-11066708 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074941 5270 Rosid View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6602 0.0 31.576    
cufflinks 11.1073 0.0 26.1986    
cufflinks 15.4774 0.0 35.5058    
cufflinks 9.66956 0.0 23.0441    
cufflinks 23.824 0.0 53.3406   High
cufflinks 10.577 0.0 24.818    

0 Strain