Gene : Eucgr.J01000 E. grandis v2.0
Defline:  (1 of 2) PTHR22814:SF73 - COPPER TRANSPORT PROTEIN CCH Genomic Order:  882
Name:  ? Eucgr.J01000 Secondary Identifier:  ? PAC:32032450
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01000 0.5kb upstream 0.5kb upstream 4159 true Chr10: 10809213-10813371 Eucalyptus grandis
Eucgr.J01000 0.5kb upstream 0.5kb upstream 500 false Chr10: 10809213-10809712 Eucalyptus grandis
Eucgr.J01000 0.5kb downstream 0.5kb downstream 4159 true Chr10: 10809713-10813871 Eucalyptus grandis
Eucgr.J01000 0.5kb downstream 0.5kb downstream 500 false Chr10: 10813372-10813871 Eucalyptus grandis
Eucgr.J01000 1.0kb upstream 1.0kb upstream 4659 true Chr10: 10808713-10813371 Eucalyptus grandis
Eucgr.J01000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 10808713-10809712 Eucalyptus grandis
Eucgr.J01000 1.0kb downstream 1.0kb downstream 4659 true Chr10: 10809713-10814371 Eucalyptus grandis
Eucgr.J01000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 10813372-10814371 Eucalyptus grandis
Eucgr.J01000 2.0kb upstream 2.0kb upstream 5659 true Chr10: 10807713-10813371 Eucalyptus grandis
Eucgr.J01000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 10807713-10809712 Eucalyptus grandis
Eucgr.J01000 2.0kb downstream 2.0kb downstream 5659 true Chr10: 10809713-10815371 Eucalyptus grandis
Eucgr.J01000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 10813372-10815371 Eucalyptus grandis
Eucgr.J01000 5.0kb upstream 5.0kb upstream 8659 true Chr10: 10804713-10813371 Eucalyptus grandis
Eucgr.J01000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 10804713-10809712 Eucalyptus grandis
Eucgr.J01000 5.0kb downstream 5.0kb downstream 8659 true Chr10: 10809713-10818371 Eucalyptus grandis
Eucgr.J01000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 10813372-10818371 Eucalyptus grandis
Eucgr.J01000 10.0kb upstream 10.0kb upstream 13659 true Chr10: 10799713-10813371 Eucalyptus grandis
Eucgr.J01000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 10799713-10809712 Eucalyptus grandis
Eucgr.J01000 10.0kb downstream 10.0kb downstream 13659 true Chr10: 10809713-10823371 Eucalyptus grandis
Eucgr.J01000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 10813372-10823371 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040990 5273 Angiosperm View MSA
124065552 5270 Rosid View MSA
123743211 5271 Pentapetalae View MSA
122791151 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0056 0.0 65.9749    
cufflinks 111.89 0.0 341.426 High  
cufflinks 9.75966 0.0 33.9448   Low
cufflinks 164.384 0.0 440.557 High High
cufflinks 40.3935 0.0 111.9 High  
cufflinks 33.4331 0.0 96.842    

0 Strain