Gene : Eucgr.J00905 E. grandis v2.0
Defline:  (1 of 2) PTHR21717//PTHR21717:SF29 - TELOMERIC REPEAT BINDING PROTEIN Genomic Order:  798
Name:  ? Eucgr.J00905 Secondary Identifier:  ? PAC:32035584
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00905 0.5kb upstream 0.5kb upstream 7779 true Chr10: 9824357-9832135 Eucalyptus grandis
Eucgr.J00905 0.5kb upstream 0.5kb upstream 500 false Chr10: 9824357-9824856 Eucalyptus grandis
Eucgr.J00905 0.5kb downstream 0.5kb downstream 7779 true Chr10: 9824857-9832635 Eucalyptus grandis
Eucgr.J00905 0.5kb downstream 0.5kb downstream 500 false Chr10: 9832136-9832635 Eucalyptus grandis
Eucgr.J00905 1.0kb upstream 1.0kb upstream 8279 true Chr10: 9823857-9832135 Eucalyptus grandis
Eucgr.J00905 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9823857-9824856 Eucalyptus grandis
Eucgr.J00905 1.0kb downstream 1.0kb downstream 8279 true Chr10: 9824857-9833135 Eucalyptus grandis
Eucgr.J00905 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9832136-9833135 Eucalyptus grandis
Eucgr.J00905 2.0kb upstream 2.0kb upstream 9279 true Chr10: 9822857-9832135 Eucalyptus grandis
Eucgr.J00905 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9822857-9824856 Eucalyptus grandis
Eucgr.J00905 2.0kb downstream 2.0kb downstream 9279 true Chr10: 9824857-9834135 Eucalyptus grandis
Eucgr.J00905 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9832136-9834135 Eucalyptus grandis
Eucgr.J00905 5.0kb upstream 5.0kb upstream 12279 true Chr10: 9819857-9832135 Eucalyptus grandis
Eucgr.J00905 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9819857-9824856 Eucalyptus grandis
Eucgr.J00905 5.0kb downstream 5.0kb downstream 12279 true Chr10: 9824857-9837135 Eucalyptus grandis
Eucgr.J00905 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9832136-9837135 Eucalyptus grandis
Eucgr.J00905 10.0kb upstream 10.0kb upstream 17279 true Chr10: 9814857-9832135 Eucalyptus grandis
Eucgr.J00905 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9814857-9824856 Eucalyptus grandis
Eucgr.J00905 10.0kb downstream 10.0kb downstream 17279 true Chr10: 9824857-9842135 Eucalyptus grandis
Eucgr.J00905 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9832136-9842135 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072271 5270 Rosid View MSA
123746350 5271 Pentapetalae View MSA
122796480 5272 Eudicot View MSA
122050200 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121311795 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.0503 0.0 82.3996 High  
cufflinks 38.418 0.0 96.6664    
cufflinks 31.1837 0.0 95.4215 High  
cufflinks 35.715 0.0 100.482    
cufflinks 73.7526 0.0 246.933 High High
cufflinks 20.58 0.0 46.3127   Low

0 Strain