Gene : Eucgr.J00907 E. grandis v2.0
Defline:  (1 of 7) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  800
Name:  ? Eucgr.J00907 Secondary Identifier:  ? PAC:32034111
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY1F-467 Eucalyptus grandis pathologic  
Egrandis PWY-7186 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00907 0.5kb upstream 0.5kb upstream 4817 true Chr10: 9845130-9849946 Eucalyptus grandis
Eucgr.J00907 0.5kb upstream 0.5kb upstream 500 false Chr10: 9849447-9849946 Eucalyptus grandis
Eucgr.J00907 0.5kb downstream 0.5kb downstream 4817 true Chr10: 9844630-9849446 Eucalyptus grandis
Eucgr.J00907 0.5kb downstream 0.5kb downstream 500 false Chr10: 9844630-9845129 Eucalyptus grandis
Eucgr.J00907 1.0kb upstream 1.0kb upstream 5317 true Chr10: 9845130-9850446 Eucalyptus grandis
Eucgr.J00907 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9849447-9850446 Eucalyptus grandis
Eucgr.J00907 1.0kb downstream 1.0kb downstream 5317 true Chr10: 9844130-9849446 Eucalyptus grandis
Eucgr.J00907 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9844130-9845129 Eucalyptus grandis
Eucgr.J00907 2.0kb upstream 2.0kb upstream 6317 true Chr10: 9845130-9851446 Eucalyptus grandis
Eucgr.J00907 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9849447-9851446 Eucalyptus grandis
Eucgr.J00907 2.0kb downstream 2.0kb downstream 6317 true Chr10: 9843130-9849446 Eucalyptus grandis
Eucgr.J00907 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9843130-9845129 Eucalyptus grandis
Eucgr.J00907 5.0kb upstream 5.0kb upstream 9317 true Chr10: 9845130-9854446 Eucalyptus grandis
Eucgr.J00907 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9849447-9854446 Eucalyptus grandis
Eucgr.J00907 5.0kb downstream 5.0kb downstream 9317 true Chr10: 9840130-9849446 Eucalyptus grandis
Eucgr.J00907 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9840130-9845129 Eucalyptus grandis
Eucgr.J00907 10.0kb upstream 10.0kb upstream 14317 true Chr10: 9845130-9859446 Eucalyptus grandis
Eucgr.J00907 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9849447-9859446 Eucalyptus grandis
Eucgr.J00907 10.0kb downstream 10.0kb downstream 14317 true Chr10: 9835130-9849446 Eucalyptus grandis
Eucgr.J00907 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9835130-9845129 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072486 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.27961 0.0 20.8673    
cufflinks 12.3685 0.0 27.5286    
cufflinks 9.28612 0.0 20.9106    
cufflinks 3.99432 0.0 9.58735   Low
cufflinks 13.3322 0.0 29.6255    
cufflinks 3.85351 0.0 9.22752   Low

0 Strain