Gene : Eucgr.J00870 E. grandis v2.0
Defline:  (1 of 8) PF01966 - HD domain (HD) Genomic Order:  764
Name:  ? Eucgr.J00870 Secondary Identifier:  ? PAC:32032909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00870 0.5kb upstream 0.5kb upstream 3822 true Chr10: 9386599-9390420 Eucalyptus grandis
Eucgr.J00870 0.5kb upstream 0.5kb upstream 500 false Chr10: 9386599-9387098 Eucalyptus grandis
Eucgr.J00870 0.5kb downstream 0.5kb downstream 3822 true Chr10: 9387099-9390920 Eucalyptus grandis
Eucgr.J00870 0.5kb downstream 0.5kb downstream 500 false Chr10: 9390421-9390920 Eucalyptus grandis
Eucgr.J00870 1.0kb upstream 1.0kb upstream 4322 true Chr10: 9386099-9390420 Eucalyptus grandis
Eucgr.J00870 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9386099-9387098 Eucalyptus grandis
Eucgr.J00870 1.0kb downstream 1.0kb downstream 4322 true Chr10: 9387099-9391420 Eucalyptus grandis
Eucgr.J00870 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9390421-9391420 Eucalyptus grandis
Eucgr.J00870 2.0kb upstream 2.0kb upstream 5322 true Chr10: 9385099-9390420 Eucalyptus grandis
Eucgr.J00870 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9385099-9387098 Eucalyptus grandis
Eucgr.J00870 2.0kb downstream 2.0kb downstream 5322 true Chr10: 9387099-9392420 Eucalyptus grandis
Eucgr.J00870 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9390421-9392420 Eucalyptus grandis
Eucgr.J00870 5.0kb upstream 5.0kb upstream 8322 true Chr10: 9382099-9390420 Eucalyptus grandis
Eucgr.J00870 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9382099-9387098 Eucalyptus grandis
Eucgr.J00870 5.0kb downstream 5.0kb downstream 8322 true Chr10: 9387099-9395420 Eucalyptus grandis
Eucgr.J00870 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9390421-9395420 Eucalyptus grandis
Eucgr.J00870 10.0kb upstream 10.0kb upstream 13322 true Chr10: 9377099-9390420 Eucalyptus grandis
Eucgr.J00870 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9377099-9387098 Eucalyptus grandis
Eucgr.J00870 10.0kb downstream 10.0kb downstream 13322 true Chr10: 9387099-9400420 Eucalyptus grandis
Eucgr.J00870 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9390421-9400420 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068985 5270 Rosid View MSA
123739075 5271 Pentapetalae View MSA
122790002 5272 Eudicot View MSA
122047991 5273 Angiosperm View MSA
121346124 5274 Embryophyte View MSA
123423985 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.870769 0.0 2.73998    
cufflinks 0.0854487 0.0 0.436629 Low Low
cufflinks 0.788819 0.0 2.5069    
cufflinks 1.01824 0.0 3.12552    
cufflinks 0.767882 0.0 2.4515    
cufflinks 1.24113 0.0 3.75256    

0 Strain