Gene : Eucgr.J00836 E. grandis v2.0
Defline:  (1 of 2) PTHR12741:SF21 - CALLOSE SYNTHASE 3 Genomic Order:  733
Name:  ? Eucgr.J00836 Secondary Identifier:  ? PAC:32032910
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6773 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00836 0.5kb upstream 0.5kb upstream 23739 true Chr10: 8972203-8995941 Eucalyptus grandis
Eucgr.J00836 0.5kb upstream 0.5kb upstream 500 false Chr10: 8995442-8995941 Eucalyptus grandis
Eucgr.J00836 0.5kb downstream 0.5kb downstream 23739 true Chr10: 8971703-8995441 Eucalyptus grandis
Eucgr.J00836 0.5kb downstream 0.5kb downstream 500 false Chr10: 8971703-8972202 Eucalyptus grandis
Eucgr.J00836 1.0kb upstream 1.0kb upstream 24239 true Chr10: 8972203-8996441 Eucalyptus grandis
Eucgr.J00836 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8995442-8996441 Eucalyptus grandis
Eucgr.J00836 1.0kb downstream 1.0kb downstream 24239 true Chr10: 8971203-8995441 Eucalyptus grandis
Eucgr.J00836 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8971203-8972202 Eucalyptus grandis
Eucgr.J00836 2.0kb upstream 2.0kb upstream 25239 true Chr10: 8972203-8997441 Eucalyptus grandis
Eucgr.J00836 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8995442-8997441 Eucalyptus grandis
Eucgr.J00836 2.0kb downstream 2.0kb downstream 25239 true Chr10: 8970203-8995441 Eucalyptus grandis
Eucgr.J00836 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8970203-8972202 Eucalyptus grandis
Eucgr.J00836 5.0kb upstream 5.0kb upstream 28239 true Chr10: 8972203-9000441 Eucalyptus grandis
Eucgr.J00836 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8995442-9000441 Eucalyptus grandis
Eucgr.J00836 5.0kb downstream 5.0kb downstream 28239 true Chr10: 8967203-8995441 Eucalyptus grandis
Eucgr.J00836 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8967203-8972202 Eucalyptus grandis
Eucgr.J00836 10.0kb upstream 10.0kb upstream 33239 true Chr10: 8972203-9005441 Eucalyptus grandis
Eucgr.J00836 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8995442-9005441 Eucalyptus grandis
Eucgr.J00836 10.0kb downstream 10.0kb downstream 33239 true Chr10: 8962203-8995441 Eucalyptus grandis
Eucgr.J00836 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8962203-8972202 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.1219 0.0 127.111 High  
cufflinks 73.7544 0.0 224.453 High High
cufflinks 47.4612 0.0 184.058 High  
cufflinks 50.1454 0.0 135.564 High  
cufflinks 57.5608 0.0 159.441 High  
cufflinks 32.087 0.0 87.0046   Low

0 Strain